Gene Afer_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1016 
Symbol 
ID8323080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1041191 
End bp1041532 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content70% 
IMG OID644952143 
Producthypothetical protein 
Protein accessionYP_003109627 
Protein GI256371803 
COG category[S] Function unknown 
COG ID[COG1416] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.041668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGCAC GAGGTGCCCT CATCCACGTC ACGACCGACG ACCTGGACGC ACTGCGAGCA 
GCACTCGGGT CGGCCGCGAA CCTCCATCGG GCCGCTCCGG ACCTCACGAT CGAGGTCGTC
TGCCAAGGTG CGGCCGTTCG CCGCCTGCTG GCGCCCTCAC CGCTCGAGCC ACTCCTGAGC
CCTGCCCTCG AATGGCGCCG CGTCCTCGCC TGTGACAACA GCCTCCAGGC ACTCGGCGCG
ACGAGCAGCG ACCTCGCCAG CGATGTCGGC CATGTGCCTG CCGCCATCGC TCACCTCGTG
GCGCGCCAGG GCGACGGCTG GGCTTACGTC AAGCTCCCTT GA
 
Protein sequence
MIARGALIHV TTDDLDALRA ALGSAANLHR AAPDLTIEVV CQGAAVRRLL APSPLEPLLS 
PALEWRRVLA CDNSLQALGA TSSDLASDVG HVPAAIAHLV ARQGDGWAYV KLP