| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1000 |
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| Symbol | |
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| ID | 8323064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1022279 |
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| End bp | 1023145 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644952127 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_003109611 |
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| Protein GI | 256371787 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.508503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTGGTCGA GCGTGCTGCC TGCCTACACC ACACGCTGCG AACTGGTCGG CACGGACCCC
GCTGATCGCG CCCTCGTCGA CAGGTTTCGT GCGCTCCTGG ACGAGTGGGG CGCCGTCGCG
AGCTTCCACG ATCCCCACAG CGAGCTCTCG CAGCTGAACG CCGATCCGAC ACCGGAGGTG
CGGGTGTCGG CACGTCTCGC ACACCTCCTC CAGGTCACCG ACGAGGCGGT CCGCGCAAGT
GGCGGCGTCA TCGATCCGGT GCGCGCCGCC GATCCGAGCG CGCTCGAACC AGACCACCCG
GTGGCGCGCC TCGGCCGTCG CTCCAGCGCG ACCTGGGACG ACGTCGAACG GGACGATGAC
ATGGTTCGAC GCCCACCCGG AACGCTGATC GACCTCGGCG GCCTCGCCAA GGCGGCCATC
GCCGATGCGA TCGCCCTCGA ACTCGCAGCC GACGCCGCCG GTGCCATCCT CGTCAACCTC
GGTGGCGACC TCCGCTGCGT CGGAGAAGCC CCCTGGTCGA TCCTCGTCAC CGACGATGGA
TCTTTGCGGC CCGACGCGCC CGGCCAGCGG ATCCACATCC CCGCTGGCGC GGTCGCGACG
AGTGACCGCG CGACGCGCCG ATCGCCACGG GGTCTCGATC ACATCGTCGG TGCCTCCACG
CTCCCTGGCG CTGCCCGCCG CGCCACCGTC GTCGCCGAGA GCGCCGCGGC GGCCAATGCA
GCCAGCCTCG CGATCATCGC CGCTGGACGC GCCTGGCACC GCATGTGGCG CCGCTACGAG
CTGTCGGCGC TCGTCGTGAC GAATGCCGGC GAACGCCTCC CCCTTGGCGG CTGGCCACCA
CGTCTCGAGG AAGCGGCCGC GTGCTGA
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| Protein sequence | MWSSVLPAYT TRCELVGTDP ADRALVDRFR ALLDEWGAVA SFHDPHSELS QLNADPTPEV
RVSARLAHLL QVTDEAVRAS GGVIDPVRAA DPSALEPDHP VARLGRRSSA TWDDVERDDD
MVRRPPGTLI DLGGLAKAAI ADAIALELAA DAAGAILVNL GGDLRCVGEA PWSILVTDDG
SLRPDAPGQR IHIPAGAVAT SDRATRRSPR GLDHIVGAST LPGAARRATV VAESAAAANA
ASLAIIAAGR AWHRMWRRYE LSALVVTNAG ERLPLGGWPP RLEEAAAC
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