| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0992 |
|---|
| Symbol | |
|---|
| ID | 8323056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1014610 |
|---|
| End bp | 1015383 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644952119 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003109603 |
|---|
| Protein GI | 256371779 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCA CCACGACGAC GCGCCAACCG GTGCTCGAAC TGCGCCACCT CTCGCTCACC
TACGGATCCG TGGTCGCCCT CGAGGACGTC AGCCTCCAGG TGTACCCGAG CGAGGTCATC
GGCATCGTCG GCGACAACGG TGCCGGCAAG TCCTCCCTCA TCAAGACGAT CTCGGGCGTC
CTCGAACCCG ACAAGGGCGA GATCTGGGTC GACGGCGAGC AACGACACTG GCGCTCACCC
CGCGAGGCGC GAACCGCCGG TATCGAAACC CTTTACCAGG ACTCCGGACT CGCACCGGAT
CTCTCCATCG GATCGAACCT CTTCCTCGGC CGTGAGCGAC GTCGGCGTGG GTTGCTCGGC
AGGCTCGGCT TCGTCGATCA GCGAAGCATG GAGCGCGAGG CCCTCGCCGA ACTCCAGCGT
GTCGGCATCA CCATCGAGGG CATGGGCCGC ACGGTCGCCG AGCTCTCCGG CGGACAGCGC
CAGGCGGTCG CCATCGCGCG CACGATCACC TGGGCTCGCC ATGTCATCAT CCTCGACGAA
CCCACGAACC ACCTCGGAGC ACGCCAGAGC CTCGAGGTGC TCAAGGTCAT CCGCGCGGCG
CGCGACCGTG GGCTCAGCGT CCTCTTCATC TCCCACACGC TCCCCCACGT GCTGGAGGTC
TGCGACCGGA TCATCGTGTT GCGGCTCGGT CGAGTGGTAC GTGACGCCCC GACGTCCGAG
TTCACAGTCG AGAGCCTGCT CGCTGCGATC ACCGGTCTCG ACGATCGTAG CTGA
|
|---|
| Protein sequence | MTSTTTTRQP VLELRHLSLT YGSVVALEDV SLQVYPSEVI GIVGDNGAGK SSLIKTISGV
LEPDKGEIWV DGEQRHWRSP REARTAGIET LYQDSGLAPD LSIGSNLFLG RERRRRGLLG
RLGFVDQRSM EREALAELQR VGITIEGMGR TVAELSGGQR QAVAIARTIT WARHVIILDE
PTNHLGARQS LEVLKVIRAA RDRGLSVLFI SHTLPHVLEV CDRIIVLRLG RVVRDAPTSE
FTVESLLAAI TGLDDRS
|
|---|
| |