Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0956 |
Symbol | |
ID | 8323020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 977838 |
End bp | 978986 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644952084 |
Product | rod shape-determining protein RodA |
Protein accession | YP_003109568 |
Protein GI | 256371744 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0772] Bacterial cell division membrane protein |
TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.215548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACAT CGCTCGCCCC CAGATCCCGC GGGACGACGT GGGCGCGCCT TCGCAGCTAC GACGCGCTCC TGTGGTTGCT CGCCGCGGCC GTGGGCGTCT TCGGTGTCGT GATGGTGTAC TCGGCGACCC GGAACCAACT GGAACTTGCT GGCCTCTCGC CGCACTACTA CCTCGATCGT CAGGCGATCT TCTGGGTGCT CGGGCTGATC GTGATGAGCG TCGTCGCCGC GCTCGATCTC GAGTGGCTCG GTCGTCTCGG CTACTGGATC TACGGTGCGG TGCTGCTCGG CCTCGTGGCC GTGTTGTCGC CGGTCGGGTC GTCGGCGCTC GGGTCCCAGC GGTGGTTCCA GCTCGGCCCG ATCCAGGTGC AGCCGTCGGA GTTCGCACCC ATCGGCGTGA TGTTCGGTAT CGCGGCCTAT CTCTCGGGAC GCGATGGACC GCGGACGTGG CGCGAGGTGG CCGTGGTCCT CGCGCTCGGG GGTGTGCCGG CACTGCTCGT GGTGAAGCAG CCGGACCTCG GCACCGGCAT CGTGGTCGGT ATCGTCACCA TGGTGCTCCT CGTCATGGGT GGCGCCACCG GTCGTCAGCT CCTCGTGATC CTGGTTGCCG GGGTGCTCGG GATCATCGCC GTCGTGCACC TCGGTCTGCT GAAGCACTAC CAGCTCGAGC GGCTCCTCTC GTTCGTGAAC CCGCAGTCGG CGACCCAGAC CTACGGCTAC AACCTGGTCC AGTCGAAGAT CGCCATCGGT TCGGGGCACA TCTTCGGCAC CGGCCTCTTC AAGGGGAGCC AAACGAACCT CGCCTACGTT CCCGAGCAGC AGACCGACTT CATCTTCACG GCGGTGGGCG AACAGCTCGG CTTCATCGGT GCCGGTTCGC TCGTGCTGGT GTACGGCATC ATGCTGGCCA GGTCGTATCG GGTGCTGCGT TCGGCGGCGG ATCGAGTCTC CATGCTGCTC GTCGCCGGCG CGATCGCGTG GATCGGATTC TCGGTGTTCC AGAACATCGG CATGACGATC GGCATCATGC CCATCACCGG GATCCCGTTG CCGTTCGTCT CCTACGGCGG CTCGGCGATG CTCGGCTTCT CCTCGGCGGT GGGCATCGTG CTCTCTGCCG GGTCGAGGCG ACTGCGACGT GCCAGCTGA
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Protein sequence | MATSLAPRSR GTTWARLRSY DALLWLLAAA VGVFGVVMVY SATRNQLELA GLSPHYYLDR QAIFWVLGLI VMSVVAALDL EWLGRLGYWI YGAVLLGLVA VLSPVGSSAL GSQRWFQLGP IQVQPSEFAP IGVMFGIAAY LSGRDGPRTW REVAVVLALG GVPALLVVKQ PDLGTGIVVG IVTMVLLVMG GATGRQLLVI LVAGVLGIIA VVHLGLLKHY QLERLLSFVN PQSATQTYGY NLVQSKIAIG SGHIFGTGLF KGSQTNLAYV PEQQTDFIFT AVGEQLGFIG AGSLVLVYGI MLARSYRVLR SAADRVSMLL VAGAIAWIGF SVFQNIGMTI GIMPITGIPL PFVSYGGSAM LGFSSAVGIV LSAGSRRLRR AS
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