| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0953 |
|---|
| Symbol | |
|---|
| ID | 8323017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 974561 |
|---|
| End bp | 975568 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644952081 |
|---|
| Product | aminodeoxychorismate lyase |
|---|
| Protein accession | YP_003109565 |
|---|
| Protein GI | 256371741 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
|---|
| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.316253 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGAGGGT GGCCGAAGCG GCTCGTCGCT CTCGCGCTCG TGGTGGTGCT CGCGCTCGGG
GCGATCGGGG TCGCGTATCT CGCCGAGGCG GCGCCGAGCT CGTCGGGTCA CGAGGTTGCG
GTACTCATCG AGCCCGGGAC GTCGCTCGAG GGGGTGTCTT CCCTCCTCGC GCGCGAGGGC
GTCGTGCGCA ACGGCACGTT GTTCGACCTC TACCTGCGCC TTCGCGGATC GCCGACGGTG
GATGCGGGGG TGTACTTCTT GCGCACCGGG GAGGGCTACG CCGGCGCACT GTCGGCCCTG
ACGGCGGGGC CAGCAACGGT ACGGCTCGTG GTGGTGCCGG GGATGACGAT CGCTCAGATC
GCAGCCAGGC TCGCCGCACT GCCGGAGGCC GGTCACAACG GGGGTGCGTT CGTCGCGGCA
GCGTCTGCCG TGCACAGCTA CCACAATCCC TTCCTGCGCG GCGCGAGGTC GCTCGAGGGC
TTCCTCTACC CCGACACCTA CTTCGTCGAT CCGGCCCAGA CGCCGCACGA GCTGATCCAG
GAGATGGTGG ATCGCTTCAC CCAGGAGGCC CTCGGCGTGG GTCTCGAGCC GGGGGGGACC
TACCACGGTC TGAGCGCCTA CCAAGTGGTC ATCGCGGCGT CCATCGTGAC CAAGGAGGCC
ACGGCCGCGT CCGATGCCCC CAAGGTGGCC CGCGTGATCC TCAATCGACT GGCCGCGGAC
ATGCCGCTCG ACATGGACTC GACCGTGCGC TTTGCGACCG GCAACGAGAA CGCGCCGCTG
ACGGCGGCCG AACTCGCCTC GCCCTCGCCG TGGAACACCT ACACCCATCG AGGGTTGCCG
CCGACCCCGA TCGGTCAGCC GTCCGTGGCC GCCATCGACG CGGTGCTCCA TCCCGCCACC
GGACCGTGGC TGTACTTCGT CGCGCTCCGC GGGCATCGGA CCGAGTCGTT CTTCACGACC
TATGCCGCGC AGCAAGCGGC GATCGCGCGC TACGGAGAGG CCGGGTGA
|
|---|
| Protein sequence | MRGWPKRLVA LALVVVLALG AIGVAYLAEA APSSSGHEVA VLIEPGTSLE GVSSLLAREG
VVRNGTLFDL YLRLRGSPTV DAGVYFLRTG EGYAGALSAL TAGPATVRLV VVPGMTIAQI
AARLAALPEA GHNGGAFVAA ASAVHSYHNP FLRGARSLEG FLYPDTYFVD PAQTPHELIQ
EMVDRFTQEA LGVGLEPGGT YHGLSAYQVV IAASIVTKEA TAASDAPKVA RVILNRLAAD
MPLDMDSTVR FATGNENAPL TAAELASPSP WNTYTHRGLP PTPIGQPSVA AIDAVLHPAT
GPWLYFVALR GHRTESFFTT YAAQQAAIAR YGEAG
|
|---|
| |