| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0951 |
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| Symbol | |
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| ID | 8323015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 971587 |
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| End bp | 974151 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644952079 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_003109563 |
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| Protein GI | 256371739 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.197115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATTCGA ATGACCTGAG ACGTGCGTTT CGGGAGTACT TCGTCGAGCG AGGACACGTT
CCCGTTCCCT CGGCGTCGCT CGTGCCGCAC GATCCGACGC TGCTCTTCAC GGTCGCGGGC
ATGGTGCCGT TCAAGCCCTA CTTCTTGGGC GAGGAGGTCC CGCCGTATCG TCGGGCGACC
AGCATCCAAA AGTGCATGCG CGCCGGTGGC AAGCACAACG ATCTCGATCA GGTGGGGACC
ACGGCCCGAC ACCTCACCTT CTTCGAGATG CTGGGCAACT TCTCCTTCGG CGACTACTTC
AAGGAGGGTG CGATTCCCTA CGCGTGGGGT CTCGTCACCG AGGTGCTCGG ACTCGATCCA
GACCGGCTCT GGATCACGGT GCACACGAGC GACGACGAGG CGGAGCGCAT CTGGATCGAG
GCCTGTGGGG TCCGCCCGGA GCGCATCCAA CGACTCGACG AGGACAACTG GTGGCAGATG
GGGGAGACAG GGCCGTGCGG TCCGTGCTCT GAGATCTACT ACGACAAGGG CGAGTCCTAC
GGCGCGGGCG GTGGGCCGGC GGTCGGGTCC GACGAGCGCT TCCTCGAGAT CTGGAACCTC
GTGTTCATGC AGTACGACCG CCACCCGGAC GGTTCGTTGA CGCCGCTGCC GGCACCCTGC
ATCGACACCG GTGCCGGGCT CGAGCGGATC GTGCCGGTGC TCCAGGGGCA CGACTCGGTC
TTCGAGACCG ATCTCATGTG GCCGCTCATG GAGGAGGCAC AGTCGCTGAC GGGCCGACGC
TACGGCGGTC GCTTCGGTGC GGACGCCGGT GGCGACGTCG GGCTGCGGAT CATGGCCGAT
CACGCTCGGG CGACGACGTT CTTGCTCGCT GACGGGGTCG TGCCGACGAA CGAGGGGCGT
GGGTACGTGC TGCGTCGTAT CATCCGGCGT CTCGTGGCGC GCGCGCAGCT GTTGGGCGCG
AAGGGTCCGG TCGTCGAGCC GATGGTGCGC ATGACCGCCG CCGTGATGGG CGAGGCCTAC
CCCGAGGTGG CGCGCGAGCT CGAGACGATC GTGCAGCACG CAGCGCGCGA GGAGGAGCGG
TTCGCGGCGA CGCTGGCGCT GGGGCGCCCG CTGCTCGACG CGGCCCTCGA GGGCGGCTCG
GTTCCCGGCG CGCTCGCGTT CAAGCTCCAC GACACCTACG GTTTGCCGAT CGAGCTCACG
ATGGAGCTGG CGGCCGAGCG GGGGGTGAGC GTCGATCGTG CCGGTTTCGA GGAGGCCATG
GCCGCACAGC GCGAGCGGGC CCGCCAGGCC GGGCTCGGTA CCGAGGCCGT GGAGCACCCG
GTGAGCGCCG AGGTGCTGCG CGAGCACGGC CGGAGCGAGT TCACGGGCTA CGAGGCCACC
GAGGACGAGG GGCGCCTGCT CGCACTCGCC TCCGAAGGCG ACGTGCTCGT CGCCGTCCTC
GATCGAACGC CCTTCTATCC CGAAGGTGGT GGCCAGCTCG GTGATACCGG CACGATCGAG
GGGGATGGCT TTCGCCTCAC CATCATCGAC ACCGACCAGC CCGTCGCGGG GGTGATCCGC
CACCACGTCG GAGCGGTCGA GGGCGAGCCG GTGATCGGGG CGTTGGTGCG GGCCGTCGTC
GACGCGGAGC GGCGCGAGGG TCTTCGGGTC CACCACACGG CGACGCACCT GCTGCACTGG
GCGCTTCGCG AGGTGCTCGG TCCGCACGTC AAGCAACAAG GCTCCCTGGT CGCACCGGAT
CACCTGCGCT TCGACTTCAC GCACTGGGGA CCGCTCACGC CCGACGAGAT CGAGGAGATC
GAGCGGCGGG TCGCGGCCGA GATCATCCGC GACTCGGTCG TCACGGTGGA GCTCATGGAT
CGCGACGAGG CGATCCGTCG CGGTGCGGTC GCCTTCTTCG GCGATCGCTA CGGCGACGTC
GTTCGCGTGG TGCACGCCGG TGAGTCGTCG GTGGAGCTGT GCGGTGGGAC GCACCTCGAC
CGACTCGGCC GCATCGGCCA CCTGCGCATC ACGTCCGAGA GCTCGATCGG CGCCAACACG
CGCCGGGTCG AAGCCGTCGT GCAGCTCGCC GCCCTCGAGG TGGCACACCG CGATCGGCGA
CTCCTCGACG AGCTCGAGCG GATCGTCCCG GGCGGACGCG ATGGGATCGG CGAGCGCGTC
GATCGCATCG TCGAGCGTGC CAAGCGCGCC GAATCCGAGC TCGCGCGTGA GCGCACGCGC
ACCTTGGCTG AGCGCGCCCG CGCGCTCGCC GAGACCCGGG GGGCCGACGG ACTCGTGGTG
GCGCGCGTGG ACGGTCTTGA CCAGCGGGGG GTTCGGGAGC TCGCGATGCT GGTTCGTGAC
CACGAGGGCG TGCTGGGCGT CGTGATCGGG GGCGTCGCCA ACGGCGTGGT CGCACTCGCC
GCCGCGGTGC GCGAGGGCGC TCCCTGGCGT GCCGACGAGC TGCTGCGCCC CGTCGCGCAG
GCGGTCGGTG GGGGCGTCGG TCGAGCCGAG GTGGTGGCGG TCTCCGGTGG GCGCCGTGCC
GAAGCCCTTG ACGCGGCGCT CGAGGCGGTG CGGACGGCTT CGTGA
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| Protein sequence | MDSNDLRRAF REYFVERGHV PVPSASLVPH DPTLLFTVAG MVPFKPYFLG EEVPPYRRAT
SIQKCMRAGG KHNDLDQVGT TARHLTFFEM LGNFSFGDYF KEGAIPYAWG LVTEVLGLDP
DRLWITVHTS DDEAERIWIE ACGVRPERIQ RLDEDNWWQM GETGPCGPCS EIYYDKGESY
GAGGGPAVGS DERFLEIWNL VFMQYDRHPD GSLTPLPAPC IDTGAGLERI VPVLQGHDSV
FETDLMWPLM EEAQSLTGRR YGGRFGADAG GDVGLRIMAD HARATTFLLA DGVVPTNEGR
GYVLRRIIRR LVARAQLLGA KGPVVEPMVR MTAAVMGEAY PEVARELETI VQHAAREEER
FAATLALGRP LLDAALEGGS VPGALAFKLH DTYGLPIELT MELAAERGVS VDRAGFEEAM
AAQRERARQA GLGTEAVEHP VSAEVLREHG RSEFTGYEAT EDEGRLLALA SEGDVLVAVL
DRTPFYPEGG GQLGDTGTIE GDGFRLTIID TDQPVAGVIR HHVGAVEGEP VIGALVRAVV
DAERREGLRV HHTATHLLHW ALREVLGPHV KQQGSLVAPD HLRFDFTHWG PLTPDEIEEI
ERRVAAEIIR DSVVTVELMD RDEAIRRGAV AFFGDRYGDV VRVVHAGESS VELCGGTHLD
RLGRIGHLRI TSESSIGANT RRVEAVVQLA ALEVAHRDRR LLDELERIVP GGRDGIGERV
DRIVERAKRA ESELARERTR TLAERARALA ETRGADGLVV ARVDGLDQRG VRELAMLVRD
HEGVLGVVIG GVANGVVALA AAVREGAPWR ADELLRPVAQ AVGGGVGRAE VVAVSGGRRA
EALDAALEAV RTAS
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