| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0946 |
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| Symbol | |
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| ID | 8323010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 965858 |
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| End bp | 966907 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644952074 |
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| Product | protein-export membrane protein SecF |
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| Protein accession | YP_003109558 |
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| Protein GI | 256371734 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAGG TTCGCATCGT CGAAGATGCC TCACAGCTCA GCTGGTGGCG GCGTGTCGGG
GCGGGCGCGA CGCGCATTCG CTTCGTCGAA CGGGCGCGGT GGTTCTGGGC GGTCTCGCTG
GTCGTGATCG CGGTCGGCGC GGCGGCGCTC GGGATTCGCG GCCTGAACTT CGGTATCGAT
TTTCGTGGAG GCCTCGCCTG GCAGGTGAGT GCGCCGACGC TCAGCGTCAC CCAGGCTCGT
AGCGCCCTTG CCGGGCTCCC GCTCTCTGGC ACCACGGTCG TCAGCTTGGG GACCGGTCAG
CACCGAACCA TCGAGGTGGA GGCGGATCTG CCGACCTCGG GTGCGCGAGC CCATGCGCTC
GAGAACGAGG TCGCCGCTCG ACTGGCTGCC GCAGCTCACC AGCCTTCGTC GGCGGTGGCG
ATCAACTACG TCGGTCCCAC GTGGGGATCG CAGATCACCG ACGCCTCCCT GAAGGCGCTC
GTGGCCTTCT TCGTCGGCAT CACGCTCTAC ATCTCGTTGC GCTTCGAGTG GAAGATGGCC
CTGGCGGCGC TGATCGCGGT GATCCATGAT CTCGTCGTCA CGGTCGGGAT CTATGCGCTC
TCGGGGTTCC AGATCACGCC ATCGACGGTG ATCGCGGTGC TCACCGTGCT CGGTTATTCG
CTCTATGACA CCATCGTCAT CTTCGATCGC ATCAAGGAGA ACGTCGCGAC GCACGTCGAT
CAGGCGGGGG AGATGACCTA CTCGGAGGTG GTGGACCGCT CCGTCAATCA GATGCTCGCG
CGGTCGATCA ACACGAGCGT CGTCGCGGTG ATACCGATCC TGTCCGTCTT GGTGGTGGGG
GCCTACCTCC TCGGTGCGAC GACCCTGCGC AACTTCGGCC TCGCCCTCGT GGTCGGCCTG
ACCAGCGGCG CGTACTCCTC GATCGCCATC GCATCGCCGA TCCTCGCGTT CCTCAAGGAG
CGAGAGCCCA GGTACCGACA GCTCAAGCGA CGGATTGCCG CGCGTCGTAT CGCACCTGCG
ACCGAGGCGG CGGGTACCAT CGATACGTAG
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| Protein sequence | MSQVRIVEDA SQLSWWRRVG AGATRIRFVE RARWFWAVSL VVIAVGAAAL GIRGLNFGID
FRGGLAWQVS APTLSVTQAR SALAGLPLSG TTVVSLGTGQ HRTIEVEADL PTSGARAHAL
ENEVAARLAA AAHQPSSAVA INYVGPTWGS QITDASLKAL VAFFVGITLY ISLRFEWKMA
LAALIAVIHD LVVTVGIYAL SGFQITPSTV IAVLTVLGYS LYDTIVIFDR IKENVATHVD
QAGEMTYSEV VDRSVNQMLA RSINTSVVAV IPILSVLVVG AYLLGATTLR NFGLALVVGL
TSGAYSSIAI ASPILAFLKE REPRYRQLKR RIAARRIAPA TEAAGTIDT
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