Gene Afer_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0896 
Symbol 
ID8322960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp918632 
End bp919336 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content69% 
IMG OID644952030 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_003109514 
Protein GI256371690 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.323909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCTTCG ACACCACGAG CCCGCGCCGA CAGCGCTACC TCGCCCCGAC GAGGCCGAAC 
CGGCGACGCG CGAAGCCAGG AGAGCCCGTC GCGATCGAGC CCAGCGAGCT GACGGCGCCG 
CCTCGGCTCC GGCCAGTCGT CGAGCGTCAG CTCGCCGAGG CAGCACAGCA CTATGCCGAG 
GATCGCTACG CCGAGGCGCT TCGCATCCTC ACACGCATCG AGCGCCTCGC GCCTGCGTCG 
CCCCCCATCG AAGAACTGCT CGGTCTCGTG CGCTACCGCT TGGGAGATTT CGCTCGAGCT 
GCACGCCATC TCGCCACCTT CGTTGACCTC ACCGGCGATC TGACGCACGG AGCGATCCTC 
ATGGACTGTG CTCGAGCCGA AGGCGACGCT GAGGCCGTCG AGCATTGGTG GCGCGCGCTC 
CGCGAAGCGA GCCCGTCGAA GGACGCCATG GTCGAGGGGC GTATCGTGTG GGCAAGCCAC 
CTCGCGGACA CCGACCGCCT CAGCACGGCG GTGGACGTCA TCCGTCGGGC ACTCGAACGC 
GAGCGACAGA CCACGTCGCT CCGGGCCCTC CGACTGCGCT ACCAGCTCGC GACCCTGCTC 
GAGCGACAAG GACGCTACGC AGAGGCACGA GATGCCTTTC GCGCGATCGC CCAGGTCGAT 
CCGTCGCTCT ACGACGTCGC AGAACGGCTC GCGGCGCTGG CCTGA
 
Protein sequence
MRFDTTSPRR QRYLAPTRPN RRRAKPGEPV AIEPSELTAP PRLRPVVERQ LAEAAQHYAE 
DRYAEALRIL TRIERLAPAS PPIEELLGLV RYRLGDFARA ARHLATFVDL TGDLTHGAIL 
MDCARAEGDA EAVEHWWRAL REASPSKDAM VEGRIVWASH LADTDRLSTA VDVIRRALER 
ERQTTSLRAL RLRYQLATLL ERQGRYAEAR DAFRAIAQVD PSLYDVAERL AALA