| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0887 |
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| Symbol | |
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| ID | 8322951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 908148 |
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| End bp | 909089 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644952021 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003109505 |
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| Protein GI | 256371681 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTGGGT TCGTTGCCCG ACGGCTTGGC CAGGCGATCG TCACCATGGT GGCGGTGTCG
ATCGTCGTGT TCGGGCTGCT CCATGCCTTG CCAGGGGGGC TCGTGCGCGC CCAGTTGGGC
GCGCACGTCT CCCAAGTCGC GATCCGTGCG CTCACCGTGC AAGAAGGCCT GACCAAGCCG
CTGCCGGTCC AGTACCTCTT GTGGCTGAAG GGTGTCCTCG AAGGGCAGTT GGGCCAGTCG
TTCAAACTGG GTGAACCGGT GTCGACGTTG ATCGCGCTCT ATGTCCCGAG GACGATCCTG
CTCGTCGGGG TGTCGTTGTT GCTCGCGGTC GCGATCGCGA TCCCGCTCGG TCTGTGGCAG
GGCTACCGCC GTAATCACCC GGACGACCAC GCCCTCAGCG CCATCATGCT CACGCTCTAC
TCCATGCCGA CGTTCCTGCT CGGGGTCGTG CTCATCATCG TGCTCAACTC CTGGCTCGGC
CTGTTGCCGT CGCTGGCATC GAACTTCGGC GCGAGCATCG GCACCGATGT GCGCGACCTG
GGACTGCCGG TGCTGACGCT CACGCTGGCG AACGTGAGCT ACTTCTCCCG CTACATGCGC
TCGTCGGTGA TCGACAACCT GCTCGAAGAT TACGTGCGGA CGGCACGCTC GAAGGGTGCC
TCGGAGCGTC GAGTCCTCCT GCGCCACGTC CTGCGTAACT CGCTGACGGC GACCGTGACC
ATGATCGGGC TCACGCTGCC CTATACGGTG TCGGGATCGC TCATCGTGGA AGCGCTCTTC
AACTTCCCCG GGGCTGGACT CTTGTTCTGG AACGCGGCCC AGACGCGCGA CTTCATGGTG
CTGCTCGGCA TCGTGCTCGT GATCTCGATC GCGACCATCC TTGGCAATCT CCTCGCTGAC
CTCGCCTATG GCCTGCTCGA TCCGAGAGTG CGCTACCGAT GA
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| Protein sequence | MLGFVARRLG QAIVTMVAVS IVVFGLLHAL PGGLVRAQLG AHVSQVAIRA LTVQEGLTKP
LPVQYLLWLK GVLEGQLGQS FKLGEPVSTL IALYVPRTIL LVGVSLLLAV AIAIPLGLWQ
GYRRNHPDDH ALSAIMLTLY SMPTFLLGVV LIIVLNSWLG LLPSLASNFG ASIGTDVRDL
GLPVLTLTLA NVSYFSRYMR SSVIDNLLED YVRTARSKGA SERRVLLRHV LRNSLTATVT
MIGLTLPYTV SGSLIVEALF NFPGAGLLFW NAAQTRDFMV LLGIVLVISI ATILGNLLAD
LAYGLLDPRV RYR
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