| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0886 |
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| Symbol | |
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| ID | 8322950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 906312 |
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| End bp | 908144 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644952020 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003109504 |
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| Protein GI | 256371680 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGGC AGCTGCGTCG GACGAGGTGG CATCGGAGCG CGGCGTGGAC CGGTTCGCTG
GTGGCGCTAG GCATACTGGC GGCCGCATGC GGGAGCTCGT CGGGGGCGTC GACGTCGTCG
TCGGCGGCGA CCGGACTGCC GGCGAACTAC GCCTCGTTTG CGCTGCACTC GGGCGACACG
TTCTCGTGGG TTCTCCCACT GCCGAACCAG GCCAACTACG AGCCATGGGA CCAGAACGCG
GAGTACGGGA TGTACCGACC GCTCTACGTC GCTGGCAACG GGTCCTCCCC GACCATCGAC
GAGGCGACCT CGATGGCCAA CCCGCCGACC TACAACGCCA CCGACACGCA GGTCACGGTG
ACGTTGAAGC CGTGGAAGTG GTCGGACGGG ACCCCGGTGA CCGCCCGGGA CGTCCAGTTC
TTCTTCAACA TCTATCGGGC CAACAAGGCG AACATCGCGA CGTACGTGCC GGGGAACTTC
CCCGACAACG TCGCCTCCTT CACCGTCGAC TCGCCAACGA GCTTCACGCT CACGCTCACG
CATCCGGTCA ACCCGACGTG GTTCACCGAC AACGAGCTCA CCGACGTGGT GCCGCTGCCC
CAGCAGGTCT GGGACCGTAC CTCTCCCGGT GGCAAGGTCG GCAACTACGA CGAGACCACG
GCGGGTGCCG TGGCGGTCTT CAAGTTCCTC ACGAAGCAGT CGAACGATCT GTCGACCTAC
GCGACGAACC CTCTGTGGCA GGTGGTCGAT GGCCCCTGGA AGCTCCAGAG CTACGACCCG
ACCACCGGTC GCACGGTCTT CGCACGCAAC GATGCCTTCA CCGGGCCGGA CAAGCCCAAG
CTCGCTGGGT ATGCACTCGA GAGCTTCCCG AGCCAGACCG CCGAGGTGAA TGCGCTGCGC
TCCGGTCAGC TCACCTACGG CTACTTGCCG ATCTCCGACT ACAAGCTGGA GTCGAGCCTG
TCGAAGAGCG GGTACACCAT CGCACCGTGG GTCACCGACT ACGTCCAGTG GGCCGAACTC
GGCTACACCA GCCCGAAGTA CGGGCCACTC GTCAAGCAGC TCTACATCCG CCAGGCGCTC
CAGCACCTGG TCGACGAGCC GCTGTACATG AGTCAGGCCC TGCACGGCTA CGGGCAGTTC
ACCTATGGAC CGGTCCCGAA CATCCCCGGC TCACCGTACG TGACGGCGAC GGAGCAGACC
GACCCCGACC CCTACAGCAC CGCAGCCGCG AAGAGCCTCC TCCTCGCCCA CGGCTGGACG
CTCGGGTCCC AAGGGGTGAT GGTGTGTTCG AACCCCGGGA CCGCGGCGAA CCAATGCGGT
GCGGGGATCT CGAAGGGCGA GGCCCTCAAC CTCCTCTTCA TGTACCAGAG CGGCACCCCG
ACGCTCGCGG CCCAGGTGGA GGCGTTCGCG ACCGCTGCGA AGCAGGCGGG CGTCGGCATC
TCCCTCGATC CCCAGACCCA GAGCACCATG TTCTCGATCG GCGGCGTGTG CCCCTCGGCC
GGCCCGTGCA ACTGGGGCAT CATCTTGTAC CGGACCTTCC TGTGGAACTA CGGCCAAGGC
GATGTGCTCC CGACGGGGGG TCAGATGTTC GGCAAGGGCA ACTACTGGGG AGGCGGCTAC
AGCGATCCGA CGGCCCAGTC CCTGATCGAC GAGACCCACA CCCAACCAGG GCTGAGCGCC
TTGTTCGCCT ACGAGAACTA CATCTCGCGC CAGGTCGCAG CCCTGTGGTT CCCGACGTGG
GACTGGCAGA TCTCGGTGGT CTCGAACAAG CTGCACGGCT GGAACCCACA GCAGATCTTC
GGGAATCCGA CGCCGTCGAG GTGGTACTTC TAG
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| Protein sequence | MMRQLRRTRW HRSAAWTGSL VALGILAAAC GSSSGASTSS SAATGLPANY ASFALHSGDT
FSWVLPLPNQ ANYEPWDQNA EYGMYRPLYV AGNGSSPTID EATSMANPPT YNATDTQVTV
TLKPWKWSDG TPVTARDVQF FFNIYRANKA NIATYVPGNF PDNVASFTVD SPTSFTLTLT
HPVNPTWFTD NELTDVVPLP QQVWDRTSPG GKVGNYDETT AGAVAVFKFL TKQSNDLSTY
ATNPLWQVVD GPWKLQSYDP TTGRTVFARN DAFTGPDKPK LAGYALESFP SQTAEVNALR
SGQLTYGYLP ISDYKLESSL SKSGYTIAPW VTDYVQWAEL GYTSPKYGPL VKQLYIRQAL
QHLVDEPLYM SQALHGYGQF TYGPVPNIPG SPYVTATEQT DPDPYSTAAA KSLLLAHGWT
LGSQGVMVCS NPGTAANQCG AGISKGEALN LLFMYQSGTP TLAAQVEAFA TAAKQAGVGI
SLDPQTQSTM FSIGGVCPSA GPCNWGIILY RTFLWNYGQG DVLPTGGQMF GKGNYWGGGY
SDPTAQSLID ETHTQPGLSA LFAYENYISR QVAALWFPTW DWQISVVSNK LHGWNPQQIF
GNPTPSRWYF
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