Gene Afer_0832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0832 
Symbol 
ID8322895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp854942 
End bp855619 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content72% 
IMG OID644951966 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003109451 
Protein GI256371627 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.488949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGGAG TGCGCAAGGT GCTCGCGCTG CACGGTCAGC CGGGTTCGGG TCGGAGTTTC 
GATCCTGTGG CCAGGTGGCT CGGGCGTCTC GAATTCGACG CTCCCGACCG ACCGGGATGG 
GGATCCAATC CATTGGCGCC TCGGGAGCTC GTCGCGCAGG CATCGTGGGC CAAGGAGCGG 
ATCGACGGCC CGACGGTGCT CGTGGGCTAC TCGTTCGGTG CGGCGATCGC GGCGCTCGTG 
GCGCCGACGT GCCCGGCGGT GGCCGGTGTC GTGCTGGTGG CTCCTGCCGT GACCCGCGCC 
GCGTTGGTCT GGAGCGATCG CCTCCTCGCC AGGGCCGGCG TCGGACACGT CGCGGGATCG 
TTGATCGCCG CAGTGGCGGA GCGGTCCGTG CCGGCGGCGC TGAGTGCGCG GGCTCGCCAG 
GCGTTCCTGG TCGAGCAGCG ATCGCTGCTC GACACCATCG ACCAGGTGGA GACGTCGCTT 
CGGCGGCTCG ACGTCCCGGT CATCGTCGTC GCGGGTGCTC GCGACCGCGT GGTGCCTCCG 
CGCGGCGCCC TACGGCTCCT CGAGTGCGTG CCACAGGCTC GGCTCGTCGT CTCCCGCGGT 
GGTCACGATC AGCTTGCGGA CGAGGCGGCC GTCGTCGCCG ATGCCGTTCG ATCCCTGGCC 
TCCGAACGGA GTGCGTGA
 
Protein sequence
MSGVRKVLAL HGQPGSGRSF DPVARWLGRL EFDAPDRPGW GSNPLAPREL VAQASWAKER 
IDGPTVLVGY SFGAAIAALV APTCPAVAGV VLVAPAVTRA ALVWSDRLLA RAGVGHVAGS 
LIAAVAERSV PAALSARARQ AFLVEQRSLL DTIDQVETSL RRLDVPVIVV AGARDRVVPP 
RGALRLLECV PQARLVVSRG GHDQLADEAA VVADAVRSLA SERSA