Gene Afer_0799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0799 
Symbol 
ID8322862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp810437 
End bp811624 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content72% 
IMG OID644951935 
Productcobalamin (vitamin B12) biosynthesis CbiX protein 
Protein accessionYP_003109420 
Protein GI256371596 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACATC GCGCCCCAAC CGATCTCGTC GTCCTCGTCG GCCACGGCAC GCGTCTCGAG 
CACGGTCAGG CTGAGTTCCG CGCCTTCGTC GAGCTTGCCG CTCGGCGCCT CCCGACCCGC
GTCGAGGCAG GCTTCATCGA GTTCGCCGAC CCAACCCTCG CCGACGCTGC CGACGCTGCC
GCTCGTTCTG GCGCGCGACG CATCACCGTC GCGCCCGTGG TGCTCGTCGG TGCGGGTCAC
TTGAAGGACG ACGCGGCATC GGTCGCGGCG CGCATCCGAG CACTCGCCCC CGACGCCGAC
GTGCGCCTTG CCCCCCAGCT CGGTGCCTCG AACGAGCTCC TCGAGCTCGC CGTACGCCGA
GCTCGTGCGG TCTCGCCGAT GCCGCCCGAG GCCGTTCTCG TCGTGGGACG GGGATCGACC
GACCCGAGCG CCAACGCCGA GCTCGCCGCG ATCGCGCGCC TCGTCGGCGA ACGTCTCGGC
GTCGACCTCG TCGAAGAGGC CTTCGTCTCG CTGGCCCAAC CCAGCGTCGG TGAGGGTGTG
GAACGCCTCT GGCGCCTCGG GGCCCGGAGC GTCCTCCTCG TGCCGTGGTG GCTGTTCGCC
GGCGTCCTCC TCGAGCGGGC CGAACAAGAG GCGACGGAGC GCGCAAGCGC GCTCGGGCTC
GACCTCCAGG TCGCAGAGCG CTTCGGCCCC GATCCCGCCG TCCTCGACGC CGTCTGGTAC
GGCATCGAGG ACGCCTGGCG CCAGGTTCGA TCGAGCTGCG ACACCTGTCG ATGGCGCCCC
CCGTTCTCAC CACCACCTCC CATCGCAGAC CACGGGGATC TGCGCCGCAT CGAGATCGGC
ATCGACACCC CCGACCCGGG GCGCGCGGCC GCGTTCTGGG CACGCCTCCT GGGCTATCGC
ATCGGCGATC TCGACAGCAC CGGCACCTAT CTCGACCTCG TGGCGCCCGA TGGGTCCCTG
CCGCCGGTGT TCCTCCAGCG CATCGAGACG GCGGACCCTC GCGCCAACCG CGTCCACCTC
GACCTCTACG GCGCGAGCCG CGAGACGCTC CGCGAGCGGG CCCTCGCCCT TGGCGCAGAG
GAGCGCTCCG ACCGACGCGA GGGTGTCGAC GGGGGCGCCT GGTGCGTCCT CGCCGACCCC
GACGGCGTAC AGTTCTGCGT GATGCAGGAC GAACCAGAGG CCGACTGA
 
Protein sequence
MTHRAPTDLV VLVGHGTRLE HGQAEFRAFV ELAARRLPTR VEAGFIEFAD PTLADAADAA 
ARSGARRITV APVVLVGAGH LKDDAASVAA RIRALAPDAD VRLAPQLGAS NELLELAVRR
ARAVSPMPPE AVLVVGRGST DPSANAELAA IARLVGERLG VDLVEEAFVS LAQPSVGEGV
ERLWRLGARS VLLVPWWLFA GVLLERAEQE ATERASALGL DLQVAERFGP DPAVLDAVWY
GIEDAWRQVR SSCDTCRWRP PFSPPPPIAD HGDLRRIEIG IDTPDPGRAA AFWARLLGYR
IGDLDSTGTY LDLVAPDGSL PPVFLQRIET ADPRANRVHL DLYGASRETL RERALALGAE
ERSDRREGVD GGAWCVLADP DGVQFCVMQD EPEAD