| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0797 |
|---|
| Symbol | |
|---|
| ID | 8322860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 807962 |
|---|
| End bp | 808711 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644951933 |
|---|
| Product | acyl-ACP thioesterase |
|---|
| Protein accession | YP_003109418 |
|---|
| Protein GI | 256371594 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3884] Acyl-ACP thioesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCTCG CCCCTCTGCC AGACCAGGGT CGTCGCTACG ACGACCACCG CCGCGTGCTG
CTGTCTGACA CGACGCCGGA CGGACGTCTT CGGCTCGACG CGATCGCCCG CTTCCTCCAC
GACATCGCGA CCCTCGACAA CACCGATGCC CCGCTGGTGG ACAAGGGTCT ATGGGTCATC
CGCTCGATCG ACATCGAGAT CTTCTCCTGG CCTCGCTATC TCGACGCCGT CGACCTCGCC
ACGGCGGTCT CCGGGACCGG GCGCGCGTGG GCAGAGCGTC GTACCGACCT GTTGGTTCGC
GGCGAACTCC TCGTCAGCGC CGCCGCCGTC TGGGTGAACA CCCGCCCCGA CACTGGGGCA
CCTGCGTCAC TCCCCGATGG CTTCGACGAG GTCTATGGCG AGGCCGCCGC TGGTCGTCGC
GTCCGCCCGA GCCTCGTCAT CACGACACCA GACACCGAGC CCGAGGCGAC CTGGCATCTC
GACCTACGCC GCAGCGATCT CGACATCGTC GACCACGTCA ACAACGCCAT TCATCTCGCC
CTCGTCGAAG AGGCACTGTG GCGCGCCGGC CTCTCGGCGG CGCTCACGGG ACCGACCCAT
GTCCGCATCG AGTTCCCGCG CTCACTGCCA GGAGGCTCGG CGGCCACGGT CTCGCTGTGG
GGAACCGATC CGCTCACCGT CGTGGTCGGT GACGATGAGG GCCCGAGCTC GGTCACGGCG
ATCGAGCGGC TCGAGCAGCC CTCTCCCTGA
|
|---|
| Protein sequence | MPLAPLPDQG RRYDDHRRVL LSDTTPDGRL RLDAIARFLH DIATLDNTDA PLVDKGLWVI
RSIDIEIFSW PRYLDAVDLA TAVSGTGRAW AERRTDLLVR GELLVSAAAV WVNTRPDTGA
PASLPDGFDE VYGEAAAGRR VRPSLVITTP DTEPEATWHL DLRRSDLDIV DHVNNAIHLA
LVEEALWRAG LSAALTGPTH VRIEFPRSLP GGSAATVSLW GTDPLTVVVG DDEGPSSVTA
IERLEQPSP
|
|---|
| |