Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0785 |
Symbol | |
ID | 8322847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 795514 |
End bp | 797391 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644951920 |
Product | hypothetical protein |
Protein accession | YP_003109406 |
Protein GI | 256371582 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCACC GGTTGCTACG ACGCTCGCTC GGAACACTTG CCGCGACGAG CCTCTTGGCC GTCACCGCCG CCGGACTCGC GACCGACCGC CCCCTCACGG CGCAAGCCCC GCACACGGCG GCCACCCTGG CCTCGTCGAC CACGCCAGCC GATGGCTATG TTCTCGTCGG GGCGGATGGC TCCTCGTACC CGTTCGCGAC ACAGACCTTC GGCTCGGTCT ACAACCTCGG GCTGACGGGT CTCTACGGGT CTCGCCCGCT CGCTGCTCCT GTCGTCGGGG CAGCCGCCGT GCCAGGCGGT GGCGGCTATT GGCTGGTCGG CGCGGACGGT GGGGTGTTCA GTTTCGGAGA TGCCGGCTTC TACGGCAACA CCTACACCTT GGGACTCACG GGCCTCGGTG GGTCACGTCC GCTCGCAGCT CCCATCGTCG GGATGGCCGC AACCCCCGAC GGCAAGGGCT ATTGGCTGGT GGCGGCCGAC GGCGGGGTGT TCAGCTTCGG AGATGCTGGC TTCTACGGCA ACACCTACAC CTTGGGGCTC ACGGGCCTCG GTGGGTCTCG TCCGCTCGCA GCCCCCATCG TCGGGATCGT GCCCACCCCC GACGGCAAGG GCTATTGGCT GGTGGCCAAG GACGGGGGCG TCTTCAGCTT CGGAGACGCC GGCTTCTACG GCAACACCTA CACCTTGGGG CTCACCGGTC TCGGTGGGTC ACGTCCGCTC GCAGCCCCGG TCGTCGGGAT GGCCACAACC CCCGACGGCA AGGGCTATTG GCTGGTGGCG GCCGACGGCG GGGTGTTCAG CTTCGGAGAT GCTGGCTTCT ACGGCAACAC CTACACCTTG GGGCTCACCG GTCTCGGTGG GTCTCGTCCG CTCGCAGCTC CCGTCGTCGG GATCGACCCG AGCCCTACCG GTGCCGGCTA CACCTTGGTC GCAGCCGACG GCGGGGTGTT CACCTTCGGG GACGCGAGCT TCGACGGCAC CACCTACTCG ATGGGCTACA CGGGACTTGC GGGGTCGCAC CCGCTCCCTG GCGCCATCGT CGGGGCGATC GAACTGCCCG CCATGAGCGG GGTCGACCTC AGCAACTTCA ACTGCTCGAA CCTCCCCTAC CTTCCTGTCG GTGACCCACT GCTGCTCGTC GAGTCGAACG GCTGGCCCTT CTCGTACGAC TGGACGAGCA ACTCCGGCTG CGCCCCGGAC GCGTTCCAAC AGGCGGTCGG CCTGGGGGGC TCCAGCACCC AGCTCTACGT CTTTGCCGGC GCGAGCAACA CCATCCCCCA GGGCACCAAC ATGGCGCCGC TCGCGATCCC GCCCGCCGGC ACCGCAAGCT GGTCGACGTG GAACGGCACC TCCTTCAACC CGGTGCCCCA GGCAGCACTC TCGACGCCGG CCGGTCAGCT CTACACGAGC GCCACGTCGG CGAGCGGGCC CGGTGCCTAC TTCTCCTACG GCTACGACGA AGCCGAGTAC GCCTACGCGA CCTCCTTCGT CGATCTCGGC TCCACTTCGA GCACGCTGCG CAACGCGTGG TGGCTGGACG TCGAGCTCAG CGGATCGTGG ACGAGCTCGA CGACCGCCAA CCGCGACGCG GTCTACGGGG CCCTCGCGTT CCTCGAATCG GTCGGCGTGA GCGCAGGCGT CTACTCGACC AACTACCAGT GGGGTGACAT CACCGGCGGC GCGACCCTGC CTGCCGGCAC GCCCCTCTGG GTTCCCGATC CCGGGGCGGA CCCAGCCAGC GTCTGCGCGG GCACCGCCGG GACCGAGTAT GCCCCCTTCG GCGGCGGCAC CATTCGCTAC GTCCAGTACG GAGCCACGAC GGCCTTCTCT GCCAACGGCA ACGGCACCGC GGTCGACCTC GACACGGCAT GCCCCTGA
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Protein sequence | MSHRLLRRSL GTLAATSLLA VTAAGLATDR PLTAQAPHTA ATLASSTTPA DGYVLVGADG SSYPFATQTF GSVYNLGLTG LYGSRPLAAP VVGAAAVPGG GGYWLVGADG GVFSFGDAGF YGNTYTLGLT GLGGSRPLAA PIVGMAATPD GKGYWLVAAD GGVFSFGDAG FYGNTYTLGL TGLGGSRPLA APIVGIVPTP DGKGYWLVAK DGGVFSFGDA GFYGNTYTLG LTGLGGSRPL AAPVVGMATT PDGKGYWLVA ADGGVFSFGD AGFYGNTYTL GLTGLGGSRP LAAPVVGIDP SPTGAGYTLV AADGGVFTFG DASFDGTTYS MGYTGLAGSH PLPGAIVGAI ELPAMSGVDL SNFNCSNLPY LPVGDPLLLV ESNGWPFSYD WTSNSGCAPD AFQQAVGLGG SSTQLYVFAG ASNTIPQGTN MAPLAIPPAG TASWSTWNGT SFNPVPQAAL STPAGQLYTS ATSASGPGAY FSYGYDEAEY AYATSFVDLG STSSTLRNAW WLDVELSGSW TSSTTANRDA VYGALAFLES VGVSAGVYST NYQWGDITGG ATLPAGTPLW VPDPGADPAS VCAGTAGTEY APFGGGTIRY VQYGATTAFS ANGNGTAVDL DTACP
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