Gene Afer_0785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0785 
Symbol 
ID8322847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp795514 
End bp797391 
Gene Length1878 bp 
Protein Length625 aa 
Translation table11 
GC content69% 
IMG OID644951920 
Producthypothetical protein 
Protein accessionYP_003109406 
Protein GI256371582 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCACC GGTTGCTACG ACGCTCGCTC GGAACACTTG CCGCGACGAG CCTCTTGGCC 
GTCACCGCCG CCGGACTCGC GACCGACCGC CCCCTCACGG CGCAAGCCCC GCACACGGCG
GCCACCCTGG CCTCGTCGAC CACGCCAGCC GATGGCTATG TTCTCGTCGG GGCGGATGGC
TCCTCGTACC CGTTCGCGAC ACAGACCTTC GGCTCGGTCT ACAACCTCGG GCTGACGGGT
CTCTACGGGT CTCGCCCGCT CGCTGCTCCT GTCGTCGGGG CAGCCGCCGT GCCAGGCGGT
GGCGGCTATT GGCTGGTCGG CGCGGACGGT GGGGTGTTCA GTTTCGGAGA TGCCGGCTTC
TACGGCAACA CCTACACCTT GGGACTCACG GGCCTCGGTG GGTCACGTCC GCTCGCAGCT
CCCATCGTCG GGATGGCCGC AACCCCCGAC GGCAAGGGCT ATTGGCTGGT GGCGGCCGAC
GGCGGGGTGT TCAGCTTCGG AGATGCTGGC TTCTACGGCA ACACCTACAC CTTGGGGCTC
ACGGGCCTCG GTGGGTCTCG TCCGCTCGCA GCCCCCATCG TCGGGATCGT GCCCACCCCC
GACGGCAAGG GCTATTGGCT GGTGGCCAAG GACGGGGGCG TCTTCAGCTT CGGAGACGCC
GGCTTCTACG GCAACACCTA CACCTTGGGG CTCACCGGTC TCGGTGGGTC ACGTCCGCTC
GCAGCCCCGG TCGTCGGGAT GGCCACAACC CCCGACGGCA AGGGCTATTG GCTGGTGGCG
GCCGACGGCG GGGTGTTCAG CTTCGGAGAT GCTGGCTTCT ACGGCAACAC CTACACCTTG
GGGCTCACCG GTCTCGGTGG GTCTCGTCCG CTCGCAGCTC CCGTCGTCGG GATCGACCCG
AGCCCTACCG GTGCCGGCTA CACCTTGGTC GCAGCCGACG GCGGGGTGTT CACCTTCGGG
GACGCGAGCT TCGACGGCAC CACCTACTCG ATGGGCTACA CGGGACTTGC GGGGTCGCAC
CCGCTCCCTG GCGCCATCGT CGGGGCGATC GAACTGCCCG CCATGAGCGG GGTCGACCTC
AGCAACTTCA ACTGCTCGAA CCTCCCCTAC CTTCCTGTCG GTGACCCACT GCTGCTCGTC
GAGTCGAACG GCTGGCCCTT CTCGTACGAC TGGACGAGCA ACTCCGGCTG CGCCCCGGAC
GCGTTCCAAC AGGCGGTCGG CCTGGGGGGC TCCAGCACCC AGCTCTACGT CTTTGCCGGC
GCGAGCAACA CCATCCCCCA GGGCACCAAC ATGGCGCCGC TCGCGATCCC GCCCGCCGGC
ACCGCAAGCT GGTCGACGTG GAACGGCACC TCCTTCAACC CGGTGCCCCA GGCAGCACTC
TCGACGCCGG CCGGTCAGCT CTACACGAGC GCCACGTCGG CGAGCGGGCC CGGTGCCTAC
TTCTCCTACG GCTACGACGA AGCCGAGTAC GCCTACGCGA CCTCCTTCGT CGATCTCGGC
TCCACTTCGA GCACGCTGCG CAACGCGTGG TGGCTGGACG TCGAGCTCAG CGGATCGTGG
ACGAGCTCGA CGACCGCCAA CCGCGACGCG GTCTACGGGG CCCTCGCGTT CCTCGAATCG
GTCGGCGTGA GCGCAGGCGT CTACTCGACC AACTACCAGT GGGGTGACAT CACCGGCGGC
GCGACCCTGC CTGCCGGCAC GCCCCTCTGG GTTCCCGATC CCGGGGCGGA CCCAGCCAGC
GTCTGCGCGG GCACCGCCGG GACCGAGTAT GCCCCCTTCG GCGGCGGCAC CATTCGCTAC
GTCCAGTACG GAGCCACGAC GGCCTTCTCT GCCAACGGCA ACGGCACCGC GGTCGACCTC
GACACGGCAT GCCCCTGA
 
Protein sequence
MSHRLLRRSL GTLAATSLLA VTAAGLATDR PLTAQAPHTA ATLASSTTPA DGYVLVGADG 
SSYPFATQTF GSVYNLGLTG LYGSRPLAAP VVGAAAVPGG GGYWLVGADG GVFSFGDAGF
YGNTYTLGLT GLGGSRPLAA PIVGMAATPD GKGYWLVAAD GGVFSFGDAG FYGNTYTLGL
TGLGGSRPLA APIVGIVPTP DGKGYWLVAK DGGVFSFGDA GFYGNTYTLG LTGLGGSRPL
AAPVVGMATT PDGKGYWLVA ADGGVFSFGD AGFYGNTYTL GLTGLGGSRP LAAPVVGIDP
SPTGAGYTLV AADGGVFTFG DASFDGTTYS MGYTGLAGSH PLPGAIVGAI ELPAMSGVDL
SNFNCSNLPY LPVGDPLLLV ESNGWPFSYD WTSNSGCAPD AFQQAVGLGG SSTQLYVFAG
ASNTIPQGTN MAPLAIPPAG TASWSTWNGT SFNPVPQAAL STPAGQLYTS ATSASGPGAY
FSYGYDEAEY AYATSFVDLG STSSTLRNAW WLDVELSGSW TSSTTANRDA VYGALAFLES
VGVSAGVYST NYQWGDITGG ATLPAGTPLW VPDPGADPAS VCAGTAGTEY APFGGGTIRY
VQYGATTAFS ANGNGTAVDL DTACP