| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0784 |
|---|
| Symbol | |
|---|
| ID | 8322846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 794075 |
|---|
| End bp | 795409 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644951919 |
|---|
| Product | VWA containing CoxE family protein |
|---|
| Protein accession | YP_003109405 |
|---|
| Protein GI | 256371581 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3552] Protein containing von Willebrand factor type A (vWA) domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCGGTC GCGTCCTCGG CCTCGGGCGC GCACTCGCGG AGGCGGGCGC ACCGGTGAGC
CCGGCCGAGC TCGTCGATGC GCTGCGTGCC GTGGCTGCGC TCGAGGATCT GGCGCGCTCG
CCGCTCAGGG CTGCGTTGCG CGCCACGATG GTCAAGGACG TCTCGGCGCT TCCCATCTTC
GACGTGCTGT TCGACATCTA TTTCCCGATG GCGAACCCGA CGGACCAGGA CCTCGCGGAG
CTCGACGATG CAGCGATGCG CGCCGAGCTG GAGGTTGCGT TGCGCGATGG CGATGACGAG
CGACTCGCTG CGCTGGCTGC TGCCGCGGTC GAGCGTTTCG GCGAGGTGCA CTCTGGCGCC
GCGGTCGCTG GCGCCTACTA CGCCTATCGG ACCCAGCGCG GGCTCGATCT CGAGCGGGTG
CGCGAGGAAC TCCTTGCGGG CTTGGCCCGC CCCCACGACG CCGAACTCGA CTGGCGCGAG
CGAGAACGCG AGGCGAGGCG TCGTCTCCAG TCGTTCTCGC GCCACATCGA CGATGCGGTA
CGCGCGCGTC TTGCTCGCGA GCGCGATCCC GACGAACTCG CGCACAGCCT CGGCCTGCGC
ATCGCCGACG ACGTCGACAT CATGAACGCA TCACGCGAGG AGTTGGCGGC GATTCGCGAG
GCCGTGCGTC CACTGGCTGC CAAACTGGTC GCACGGCTCG AGCGGCGTAG GACACGCCGG
GGCGGTCCAC TGGAGCTGCG TCGCACGATC CGTCGGTCGC TCTCGACCGG TGGGGTGCCC
CTCGAGCCCG TGTTCCGGCC GCGGCGACCG CATCGGCCCG ACGTGGTTGT CCTCACCGAC
ATCTCCGGTT CGGTGGCGTC GTTCGCCCGC TTCACGCTCC AGCTGCTCTG GGCGCTCGCA
GGGGAGCTGC GTCGACTTCG AGCCTTCGCC TTCATCGACG CCGTCGACGA GGTCACCCCC
CTCGTCGGGG GGTCGTGGGA CCTCGACGCT GCGCTTCGAG CGGTGGCAGA GCGCGCCGCG
GTGGTCGGCA AGCAGGGTCA CTCGGACTAT GGCGCCGTGT TTGCCCAGTT CGAAGAGCGC
TTCGTCGACG CCGTCAGTCC GAGGACCACG CTGATCGTCC TCGGCGATGC CCGCGCGAAC
TACCACGAGC CGCGAGCCGA GGTGCTCGAT CGGCTGGCGC GACGAGCGCG CGCCACCCAC
TGGCTGAACC CGGAGCCGGC ACGCTACTGG GACAGCGGGG ACTCGGTCAT GGGCGCCTAC
GCCCCATCGT GCACGTCGGT CGTCGAGTGT CGGACGCTCG CGCAGCTGGA GCGCTTCGTC
GAGGAGGTGC TGTAG
|
|---|
| Protein sequence | MIGRVLGLGR ALAEAGAPVS PAELVDALRA VAALEDLARS PLRAALRATM VKDVSALPIF
DVLFDIYFPM ANPTDQDLAE LDDAAMRAEL EVALRDGDDE RLAALAAAAV ERFGEVHSGA
AVAGAYYAYR TQRGLDLERV REELLAGLAR PHDAELDWRE REREARRRLQ SFSRHIDDAV
RARLARERDP DELAHSLGLR IADDVDIMNA SREELAAIRE AVRPLAAKLV ARLERRRTRR
GGPLELRRTI RRSLSTGGVP LEPVFRPRRP HRPDVVVLTD ISGSVASFAR FTLQLLWALA
GELRRLRAFA FIDAVDEVTP LVGGSWDLDA ALRAVAERAA VVGKQGHSDY GAVFAQFEER
FVDAVSPRTT LIVLGDARAN YHEPRAEVLD RLARRARATH WLNPEPARYW DSGDSVMGAY
APSCTSVVEC RTLAQLERFV EEVL
|
|---|
| |