Gene Afer_0777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0777 
Symbol 
ID8322839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp786934 
End bp787659 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content67% 
IMG OID644951912 
ProductABC transporter related 
Protein accessionYP_003109398 
Protein GI256371574 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCACCAC CAGCGCTCAC GATTGACGGT CTCGGGGCCG CGTGGGGCCC CGTCCAGGTG 
CTCTGGGACA TCACGTTCTC GGTCGAGGAC GGCGCCGCCA CCCTCGTCCT CGGTGCGAAT
GGAGCGGGGA AGTCCACCTT GCTCGCCACC CTCGTCGGCC TCCACGAGAC GCGCGGCGGG
TCGGTCTCGC TGTTCGGCGA GTCGGTCGAC CGGGTGCCTG CCCATCGCCG CGCTCGTCTC
GGCGTTGCGT TCATGAGCGA GCAGGGCATC TTCCCGAGTC TCTCCATCCG CGAGAACCTC
GTCCTCGGTG GCCTCCGCCT TCGCCAGAGG GAGCGAGCAG CGCGCATCGA CGAGGTCCTC
GCGATGTTCC CCGAGCTCGC CGATCGTCTC GGCGAGCCAG CAGGGAGCCT GTCGGGCGGA
CAGCGCAAGA TGGTCGGGAT CGCCAAGTGC CTCATGGCGG CCCCACGCCT GCTCATCATG
GACGAGCCCT CGGCTGGGCT TGCTCCTCGG ATCGTGAACG AGGTGATCGA TCGCCTGCGT
GATCTCCATG CCCAGGGCAT CACGCTGCTC GTGGCGGAAC AGAACGTCTC CTTCCTCGAG
CTCGCGACCG ACGTGATCGT CCTCGAGGGT GGTCGGGTGC GCTTCAGCGG CCCTCGCGAC
GCCTTCGAAC ACGACAACCA ACTCCGCGAG GCCTTCTTTG GACTCGAAGG CCTCCAAGAG
CTCTAA
 
Protein sequence
MAPPALTIDG LGAAWGPVQV LWDITFSVED GAATLVLGAN GAGKSTLLAT LVGLHETRGG 
SVSLFGESVD RVPAHRRARL GVAFMSEQGI FPSLSIRENL VLGGLRLRQR ERAARIDEVL
AMFPELADRL GEPAGSLSGG QRKMVGIAKC LMAAPRLLIM DEPSAGLAPR IVNEVIDRLR
DLHAQGITLL VAEQNVSFLE LATDVIVLEG GRVRFSGPRD AFEHDNQLRE AFFGLEGLQE
L