Gene Afer_0729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0729 
Symbol 
ID8322789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp738533 
End bp739195 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content73% 
IMG OID644951864 
Productnitroreductase 
Protein accessionYP_003109352 
Protein GI256371528 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.552696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGGCGC TCGCTGCGAT TCGGCGGCGA CGGATGCGCC GAGCGCTCAC TGCCGATCCG 
ATCGACGACG CGACGCTCGC GGCCATCGTC GACGCCGGGC TGCGAGCGCC GTCCGCCGGC 
TTCACACAGG CCGTCACCAT CGCGATCGCG CGCGAACCGG AGAGCCGCGC CCGGATCCTC 
GCAGCACTCA CGACGCCGGG GTGGCTGGCC GCGCGTCCCG AGATGCGAGG ACTCGAACGC 
GCACCGGCCC TGCTCCTCGT CACCGTCGAC CCCGCGGCCT ACGCCGAACG CTACGGTGCC 
CCCGACAAGC GCGCCGCCGG ACTCTGGAGC CTGGAACGAT GGCCCATCCC CTACTGGTGG 
GTCGACGCTG GCGCCACACT GGAAGCGATC CTCGTCGCCG CGACCGCGCT CGACATTGGG 
GCAGCCGTCA TCGGCACCTT TCGAGGCGAG GAGGTGCTGC GCGACCTCGC CGGACTCGCT 
CAGACGAGCC GCATCGTCAT CACGGTCGCG CTCGGCCACC CCCTTCCCGA GCCAGTGCAC 
GGCTCACCGT CGAGGCGAGG GCGCCTCGAC CCCCGCGACC GCGTCGTGCC GCTCGACCTC 
CAGGCGCAGC GCCTCGTGCC GATGCTCCGT AAGCTACAGG GCGGACGGTC CGGAGGTGCG 
TAG
 
Protein sequence
MEALAAIRRR RMRRALTADP IDDATLAAIV DAGLRAPSAG FTQAVTIAIA REPESRARIL 
AALTTPGWLA ARPEMRGLER APALLLVTVD PAAYAERYGA PDKRAAGLWS LERWPIPYWW 
VDAGATLEAI LVAATALDIG AAVIGTFRGE EVLRDLAGLA QTSRIVITVA LGHPLPEPVH 
GSPSRRGRLD PRDRVVPLDL QAQRLVPMLR KLQGGRSGGA