Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0700 |
Symbol | |
ID | 8322760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 706139 |
End bp | 707404 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644951835 |
Product | aminotransferase class-III |
Protein accession | YP_003109323 |
Protein GI | 256371499 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGCCGCT TGGCACCGGT GTGGAGCAAG GTGTCGCCGA TCACGGTCAC GCATGGCCGA GGCGCGCGTG TGTGGGATAC GAACGGTCAG GCATGGCTTG ACATGACGGC TGGGATCGCC GTGACCTCGA CGGGTCACGC GCATCCCAAG GTCGCCGAAG CCATCGCTCG TCAGGCCGAG CGCTTCATCC ACGCGCAGGT GAACATCTAC ACTCACGACC TCTTGCAACC GCTCGCCGAT GCCCTCGATG CGATCACGCC CGACGGTATC GACACATTCT TCTTCTCGAA CTCGGGTGCA GAGGCAACCG AGGCGGCCGT CAAGCTGGCT CGCCAGGCGA CCAAGCGCCC CAACGTCATC GTGTTCCAGG GGAGCTTTCA TGGCCGCACC GCCCAGGCGA TGGCCATGAC GACCTCGCGC ACCGGGTACC GGGCCGGCTA CATGCCGCTG CCCGCTGGCG TCTTCGTCTC GCTGTTCCCT GGCTTCCCGC GCTCGAGTCG GGTGGGTGAC GAGGTGAGTG TGGACGAGGC ACTCGACTAC CTCGACTACC TGCTCGCGTC GCAGACGGCG CCGGCCGAGA CCGCCGCCGT GGTGATCGAG CCGGTGCTCG GCGAGGGAGG CTACATCCCG GCGCCGGCGG CGTTCCTCAC CGGCGTCGTC GAACGCGCCC GGGCGCACGG CATCGTGTTC GTCGCCGATG AGGTGCAGAC CGGTTTTGGT CGTACCGGGC GGATGTTCGC CGTCGAGCAC GCCAACGTCA CGCCGGACAT CCTCGTGATG GCGAAGGGTA TCGCGTCGGG ATTTCCCTTC TCGGGGATCG GAGCATCGTG GGAGCTGATG GAGCGCTGGC CGGTCGGGAG CCACGGAGGA ACCTATGGCG GCAACCCCAT GGGCGTCGCG GCGGCGCTCG CGACCATCCA GGTGATCCAG GAGGAGGGGC TCGTCGACAA TGCGGCTCGA CGTGGCGCCC AGCTGCAGGC GTCGATGGAG CGCATCGCCG AGAAGTTCGA GTGCGTGAGC CGAGTTCGTG GCCTCGGGCT GATGGTCGGT GTCGAGCTTC GTGACGACGC GGGGCGGCCC GATGCGGACC TCGTCGGCCG AGTGCTCGCC GAGATGCAGG CGAGCCACCG CGTGCTCGCG ATGAGTGCTG GCACCTTCGG CAACATCATC CGCTGGATGC CCCCGCTCGT GGTGAGCGAG GCCGAGATCG ACGAGGCCGC CGCCGCGTTC GAGGCGTCGC TGGCCCACGT GCTCGCACAG CGGTAG
|
Protein sequence | MGRLAPVWSK VSPITVTHGR GARVWDTNGQ AWLDMTAGIA VTSTGHAHPK VAEAIARQAE RFIHAQVNIY THDLLQPLAD ALDAITPDGI DTFFFSNSGA EATEAAVKLA RQATKRPNVI VFQGSFHGRT AQAMAMTTSR TGYRAGYMPL PAGVFVSLFP GFPRSSRVGD EVSVDEALDY LDYLLASQTA PAETAAVVIE PVLGEGGYIP APAAFLTGVV ERARAHGIVF VADEVQTGFG RTGRMFAVEH ANVTPDILVM AKGIASGFPF SGIGASWELM ERWPVGSHGG TYGGNPMGVA AALATIQVIQ EEGLVDNAAR RGAQLQASME RIAEKFECVS RVRGLGLMVG VELRDDAGRP DADLVGRVLA EMQASHRVLA MSAGTFGNII RWMPPLVVSE AEIDEAAAAF EASLAHVLAQ R
|
| |