Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0669 |
Symbol | |
ID | 8322729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 678436 |
End bp | 678918 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644951808 |
Product | ATP-cone domain protein |
Protein accession | YP_003109296 |
Protein GI | 256371472 |
COG category | [K] Transcription |
COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.528006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCTGTC CCTTCTGCGG CACCAACGAA GATCGCGTCG TCGAGACGCG GGTCGCTGAC GACGGCGCGG CGATCCGGCG GCGACGCGAG TGCCTTGGTT GCGGTCGACG CTTCACGACA TTTGAGCGCA TCACCGAGGC GCGTGTCTTG GTTCGCAAGC GCTCGGGCCA GCTCGAGCCG TTCGACCGCG ACAAGCTGCG GCGCGGGGTG CAGGCTGCGC TGAAGAATCG CCCCATCGGT GCCCTCGAGA TCGAGCGCCT GTTGGCCGAG GTCGAGGAGG CGGTGCGGGC GGTCGACGAG GTGGAGTCGG CGGAGCTCGG TCTGCGGGTC CTCGAGGGCC TCCGTCAACT CGATCCGGTC GCCTACGTGC GCTTTGCGAG TGTGTACCAG AACTTCACCG ATGCCGACGA CTTTCGGCGC GTGCTCGCCG ACCTCGGTCC GAAGCGCATC GCGAAGGTTC GCCCCGAGGG CCAGGCGCGA TGA
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Protein sequence | MRCPFCGTNE DRVVETRVAD DGAAIRRRRE CLGCGRRFTT FERITEARVL VRKRSGQLEP FDRDKLRRGV QAALKNRPIG ALEIERLLAE VEEAVRAVDE VESAELGLRV LEGLRQLDPV AYVRFASVYQ NFTDADDFRR VLADLGPKRI AKVRPEGQAR
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