Gene Afer_0669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0669 
Symbol 
ID8322729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp678436 
End bp678918 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content69% 
IMG OID644951808 
ProductATP-cone domain protein 
Protein accessionYP_003109296 
Protein GI256371472 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.528006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCTGTC CCTTCTGCGG CACCAACGAA GATCGCGTCG TCGAGACGCG GGTCGCTGAC 
GACGGCGCGG CGATCCGGCG GCGACGCGAG TGCCTTGGTT GCGGTCGACG CTTCACGACA
TTTGAGCGCA TCACCGAGGC GCGTGTCTTG GTTCGCAAGC GCTCGGGCCA GCTCGAGCCG
TTCGACCGCG ACAAGCTGCG GCGCGGGGTG CAGGCTGCGC TGAAGAATCG CCCCATCGGT
GCCCTCGAGA TCGAGCGCCT GTTGGCCGAG GTCGAGGAGG CGGTGCGGGC GGTCGACGAG
GTGGAGTCGG CGGAGCTCGG TCTGCGGGTC CTCGAGGGCC TCCGTCAACT CGATCCGGTC
GCCTACGTGC GCTTTGCGAG TGTGTACCAG AACTTCACCG ATGCCGACGA CTTTCGGCGC
GTGCTCGCCG ACCTCGGTCC GAAGCGCATC GCGAAGGTTC GCCCCGAGGG CCAGGCGCGA
TGA
 
Protein sequence
MRCPFCGTNE DRVVETRVAD DGAAIRRRRE CLGCGRRFTT FERITEARVL VRKRSGQLEP 
FDRDKLRRGV QAALKNRPIG ALEIERLLAE VEEAVRAVDE VESAELGLRV LEGLRQLDPV
AYVRFASVYQ NFTDADDFRR VLADLGPKRI AKVRPEGQAR