| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0661 |
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| Symbol | |
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| ID | 8322721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 670601 |
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| End bp | 671635 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644951800 |
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| Product | peptidase M20 |
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| Protein accession | YP_003109288 |
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| Protein GI | 256371464 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01900] succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGGACC CGGTCGAGCT CGCGGCGGCC TACCTCGAGG TTCCCTCCGT CACCGGCGAC
GAGGCGGCGC TCGCTCGGCT CGTCGGTGAG CACCTCGATG CGGCGGGGCT TCGAGTCGAG
GTGGTGGCGG GCTGCGTCGT GGCTCGCAAC CACGGCGGGG ACTCCTCGGC GACGCTGCTC
GTCGGCCATC TCGACACCGT TCCCGGTGAG CTCCCTGTCG CCGTCGACGA ACTGGTGTTG
CGTGGACGGG GTGCCGTCGA CATGAAGGCA GGGCTCGCGG TCGCGGTGGC GCTGGCGTGC
TCGGAGCCCT CCGTGCCCGT GACCGTCGTC GCCTATCCGG GCGAGGAGGG TCCGATCACA
GGCAACGGGC TCGCGCACCT CGTGGCCGAG CGCCCCGAAC TCCTCGCGGG TGCTCGCGGC
GTGCTCCTCG AACCCACGGG TGGGTTCCTC GAGCTGGGGT GCCAAGGGGT CGTGCGCGCG
ACGCTCCGAC TGCGTGGGCG TCGAGCCCAC GTTGCTCGAG CCTGGATGGG CCGCAACGCC
ATCGATCGGG TCGGCGAGGC GCTCGGGACG CTTCGCGCCC TGGAACGTCG CGAACCCCAG
ATCGGCCCGG TGCGCTACCG CGAGGCGATC GAGGTCGTCG GGGTGCGTGG GGGCGTTGCA
TGGAACGTCG TGCCGGACCT CGTCGAGATC GACGTGAGCT ATCGGTTCGC CCCCGACCTC
GATGCTGCCC GGGCGCGCCA GCGCCTCGAG GAGGCCGTGC GTCCCGTGAT GGACGACGGT
GATGACCTCG AGGTCGCCGA GGCCGTGCCG GGCGCGGTGA GTGACCTCGG TCGGTTCGGC
GCACTGCGCA GCGGCGCGTT CGGCGTGCGT GCCAAGCTCG GCTGGACCGA CGTCGCCCAA
CTCGTCGCGG CGGGCGTGCC GGCGGTGAAC TTCGGACCGG GGGATCCAGA ACTTGCCCAC
ACGGATCAGG AGATGGTCGA GGTGGCCGAG GTGCGCCACG TCGCCCAGGC GCTGTGGCGG
TGGTTGCACG CCTAG
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| Protein sequence | MRDPVELAAA YLEVPSVTGD EAALARLVGE HLDAAGLRVE VVAGCVVARN HGGDSSATLL
VGHLDTVPGE LPVAVDELVL RGRGAVDMKA GLAVAVALAC SEPSVPVTVV AYPGEEGPIT
GNGLAHLVAE RPELLAGARG VLLEPTGGFL ELGCQGVVRA TLRLRGRRAH VARAWMGRNA
IDRVGEALGT LRALERREPQ IGPVRYREAI EVVGVRGGVA WNVVPDLVEI DVSYRFAPDL
DAARARQRLE EAVRPVMDDG DDLEVAEAVP GAVSDLGRFG ALRSGAFGVR AKLGWTDVAQ
LVAAGVPAVN FGPGDPELAH TDQEMVEVAE VRHVAQALWR WLHA
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