| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0657 |
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| Symbol | |
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| ID | 8322717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 666664 |
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| End bp | 667428 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644951796 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_003109284 |
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| Protein GI | 256371460 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGCTGA CCAAGCTCGT CGGGGCGGGC AACGACTTCC TCGTGACCAC CGATCCGGAC
GAGACGGCGC GGCTCGAGCC GAGCGTCGTC GTGGCCCTGT GCGATCGCCG CAACGGCGTC
GGTGCCGACG GGGTGATTGG TCTGGATGCG CACGACGCCA TGGTGCTCTA CAACGCCGAT
GGGTCGAGGG CCGAGATGAG CGGGAACGGC CTGCGCTGTC TCGGGCACCT CGTCACCGAG
GAGCGAGGCG TGGGCGAGGT GGCGTTCGAG ACCGACGCTG GCCGGCGGAT CTATCGGCGC
GTCGGGCGTG AGGGAGGCAG CGTCCTCGGG GCGACCACCA TGGGTCCGGT CAGCGTGCGG
GCGAACGAGC GCGGTTGGTT CGTCGACGCC GGCAACCCGC ACGAGGTGCG CCAGCTCGCG
AGCCCGCAGG AGCTTGCGAG CCTCGACGTG GCGAGCCTCG GTCGTTGCGC CCAGGCGCAC
TACCCTCAGG GGGTGAACGT GGAGTGGGCC GTGGTGCTCG CGCCGGACGA GGTGGTGATG
CGGGTGTTCG AGCGTGGCGT CGGTGAGACG GAGGCCTGTG GTACCGGATC GACGGCCGTC
GCGGTGGCGC TCGCGTCCGC AGGGCTCGTC GAGCGCACGT CGGTGCGGGT GCGCAACCCG
GGCGGGGCAC TCACGGTCGA GGTCACCGAG CCAGAGCCTG TCCTCGTGGG TCCGAGCCGC
CTCGTCGCCT CCGTCGACGT CGACGTGGAG GCGCTTCGCG CGTGA
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| Protein sequence | MRLTKLVGAG NDFLVTTDPD ETARLEPSVV VALCDRRNGV GADGVIGLDA HDAMVLYNAD
GSRAEMSGNG LRCLGHLVTE ERGVGEVAFE TDAGRRIYRR VGREGGSVLG ATTMGPVSVR
ANERGWFVDA GNPHEVRQLA SPQELASLDV ASLGRCAQAH YPQGVNVEWA VVLAPDEVVM
RVFERGVGET EACGTGSTAV AVALASAGLV ERTSVRVRNP GGALTVEVTE PEPVLVGPSR
LVASVDVDVE ALRA
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