| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0646 |
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| Symbol | |
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| ID | 8322706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 653026 |
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| End bp | 653955 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644951785 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_003109273 |
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| Protein GI | 256371449 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCACCAA CGGTGGCGTT CGGACCGGAG ATCACGGCGA TGGCGACGCC ATTTGGCACC
GATGGCGCGC TCGACCTCGC GGCCGCAGAG CGCGTTGCCA GATGGCTCGT GGACCAGGGA
TCGAGCGCGA TCGTCGTGAC CGGCTCGACG GGTGAGTCGG CAACGCTCAG CGACGACGAA
CGGGCCACGC TGTGGCGGGT GGTTGCAGCC GCGGTCGACG TGCCGGTCAT CGCGGGGGCG
ACCACCAACG ACACGGCGCA CTCGCTCCGG CTCGTCGACG CCGCCGAGCG GGCCGGGGCC
AAGGGAATCC TTGCCGTCGT TCCCTACTAC AACCGTCCTC CCCAGGCCGG TCTCGTGCGT
CACTTCGGCC AGATCGCCCG AGCGACGAGC TTGCCCGTGC TGCTCTACGA CGTGCCCGCG
CGCACCGGGC GTCGACTCGA GCCCGAGACG ACGCGTGAGC TCGCTCGGAC GTCGACGAAC
GTGGTCGGCC TGAAGGATGC CTCCGGCGAC CTCGCGGCAG CTGCCGCACT GGTGGCCGAG
GCGCCCGATG GGTTCGTGCT CTACTGCGGC GACGATGCCC TCGTCTTGCC CTACCTCGCG
ATCGGGGCGG TGGGCGTGGT CTCGGTTGCG GGTCACTGGG CCGGCCCGCT CCAGCGGGTG
ATGATCGAGG CTGCGCGCTC GGGGGACTGG GAGCGAGCCC GGCGGCTGAA CGCGGCGCTC
GAGGCGTCCT ATCGCTTCGA GAACCAGCTC GCCTACCCGA ACCCCATCCC GACCAAGGCG
ATGCTCGCCG CATTGGGTCT TGCCGAGCCG GTCTGTCGAT CGCCGCTCAT CGATCCGACG
CCCACGCTGA TCGACGAGGC GCGCAGCGTC CTCGCCGATC TCCACGCACA GGCCGACAAG
GAAGGCATCG AGCTTCGTGT CAAGGCCTGA
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| Protein sequence | MAPTVAFGPE ITAMATPFGT DGALDLAAAE RVARWLVDQG SSAIVVTGST GESATLSDDE
RATLWRVVAA AVDVPVIAGA TTNDTAHSLR LVDAAERAGA KGILAVVPYY NRPPQAGLVR
HFGQIARATS LPVLLYDVPA RTGRRLEPET TRELARTSTN VVGLKDASGD LAAAAALVAE
APDGFVLYCG DDALVLPYLA IGAVGVVSVA GHWAGPLQRV MIEAARSGDW ERARRLNAAL
EASYRFENQL AYPNPIPTKA MLAALGLAEP VCRSPLIDPT PTLIDEARSV LADLHAQADK
EGIELRVKA
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