| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0638 |
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| Symbol | |
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| ID | 8322698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 643567 |
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| End bp | 646224 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644951777 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_003109265 |
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| Protein GI | 256371441 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.268252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGTCCGC ATCGGTTCGG AGGCAAGGGC AACCAGTTGG CGCGCAAGCT CAGAGTGTAC
GAAATCGCGA AGGAACTCGG TCTCTCCAAC AAGGAGGCGC TGGATCTGTG CCTCGCGTTG
GGCGTGGACG TGAAGAACCA CTCCTCGAGC GTCGAGGAGG CCCATGCAGA CCGGATCCGA
CGTCGCGCGC AGCGAGATCA TCTCGGCATC TACGCCGAGG CAACGACCCC CCAGGTGGCC
CCGCCGAGCG CGCCGACCAC GCCACCGAGC GTTCGTGAGC CCGAGCCGGT GGCGGCTCCC
GAGATATCGG AGCCGGTCGT GGCGAGCGCA CCCGAGCGGC GCCCCGACCT CGCCGCGGTG
ATCGCCGAAG AGGCGGCCAA GCGCGAAGAG GCCGAGCAGG CTGCCATCGA GAACGCGGGT
CGAGCGCCGG AGCAGGCGGC GCCGCGACGT CAGGGCCCGC TCTCGCCATC GGGGAATCCG
ATCCCACCAC CCCCGGGCGG GCGACCGCTG TCGCCGTCGG GTAAGCCGAT CCCTCCGCCA
CCACGTCCAC AAGGTCCACG CGACGGACGC GGCCGACCGG CTCGCGAGGG GTCCGGGCGC
CCTGTGGGCG GGTCGCGTCC GGGTGCCGGG CGCCCCGGAA CCGGTGGCGG GCGCCCCCCG
ATGGGGGGTG GGATCCGGCC GCCGGCCCGC GGTGGCGGCG GCGTCAGCAC GCCCCGATTC
GGGGGCGCAG CCGGTGCGTT CGCTGGCCGT CCCGGTGGCG GTCGGGGCCG TGGCGTGCGT
CCGAACAAGA GTCGGCGGCG CATCTCGCGC AAGGAGTTCG AGGAGCTCGA GCCGACCCGA
GCGACGGCCT ATGTCCCGTC GAACGATCCG GTCCCTGACT ACGAGGTCAT CATCGAGCGG
GGCTCGACGG CCCAAGAGGT TGCCCCCAAG CTCAACCGCT CGCCGGGCGA CCTCGTGCGC
TTCTTGCTCA TGCAGGGCGA GATGGTCACG GCGACCCAGA GCCTCACCGA CGAGATGATC
GAGCTGTACG CGGCGGAGCT GGGCGCGAAG GTGCGCCTCG TCGATCCCGG GCAAGAGCAA
GAAGCGCAGC TCGCCGCCAA GTATCTCGAT GTCGATGAGA CCCTCGATCC GACGGCCGAG
GTGGTCCGCC CTCCCGTCGT CACGGTCATG GGGCACGTCG ACCACGGCAA GACGTTGCTG
CTCGATCGCA TTCGCCACAC GAACGTCGTG GCGGGCGAGG CCGGTGGCAT CACCCAGCAC
ATCGGTGCCT ACCAGGTCGA TGTCGAGGGG GGTCGCATCA CCTTCATCGA CACCCCTGGT
CACGAGGCCT TCACGGCGAT GCGTGCGCGT GGCGCGAGCG TCACGGACAT CGTCATCTTG
GTCGTCGCGG CCGACGACGG TGTCATGCCC CAGACCGTGG AGGCCATCAA CCACGCCAAG
GCGGCGGGCG TGCCGATCAT CGTCGCGATC AACAAGATCG ACCGTCCTGA CGCGGATCCG
AATCGGGTCA TGCAGCAGCT CTCCGAGCAC GGCCTCGTGC CCGAGGCCTG GGGTGGCGAC
ACCATCACGG TGCAGGTGTC GGCGCTGCAG AGTCTCGGGA TCGACGAGCT GCTCGAGCAG
GTGCTCGTGC TGGCCGAGGT CCTCGAGCTG CGTGCCAACC CGACGGGTCG GGCTCGCGGT
GTGGTGCTCG AGGGACACCT CGACGTCGGT CGTGGTCCGG TCGCAACCGT GTTGGTGCAG
GGCGGCACCC TGCACGTCGG TGATCCCGTG GTCGCCGGCC AGGCATGGGG CAAGGCCAAG
GCGCTCATCA GCGATCGGGG AGAGAAGGTC TCCGATGCCG GCCCGTCGAC GCCGGTCCAG
GTCCTCGGGT TCTCGGAGGT GCCGAGCGCG GGTGATCCGT TCCGCGTGAC GGCCGAGATC
TCGCACGCCA GGGAGATCGG CGAAGCGCGC GAGCAGCGGC TGCGGTTGGC GGCGAACGCC
AACCGGGCGG TCGGCGCACA GGGCGTGCGG CTCGAGGACA TCTTCGAACA GATCCAACAA
GGCGAGGTCC CTACCCTCAA CCTCATCGTC AAGGCCGACG TCCAGGGCAG CCTCGAGGCG
CTCTCGGATG CGCTCGCGAA GCTCTCGCGC GACGAGGTGC GACTCGAGAT CATCCACAAG
GCCGTCGGTG GGATCACCGA GAACGACGTC ACGCTCGCGG CGGCGTCGCA CGCACTCATC
ATCGGGTTCA ACGTCCGGCC GGATCGCCGA GCGCGTGAGG CCGCCGAGGT CCGTCACGTG
GAGATCCGTA CCTACGAGAT CATCTACCAG GTGATCGAGG ACATCGAGGC GGCCGTGGTC
GGCATGCTCA AGCCGGAGTT CGAGGAGGTG GTCGTCGGCG AGGCCGAGGT TCGCGAGGTC
TTCCGGATCC CGCGCGTCGG TGCCGTCGCA GGGTGCTACG TGCGCAACGG AACCTTGACC
CGTGGTGGCC GCGTGCGATT CCTCCGAGAC GGGGTCGTGC TGTGGAAGGG GACGATCTCC
TCGCTGCGCC GCTTCAAGGA GGACGTGCGC GAGGTCCAGG CCGGGTTCGA GTGCGGCGTT
GGGCTCTCCG ATTTCCAGGA CCTCCATGCA GGCGACATCA TCGAGGCGTT CGAGCTGCGT
GAAATCCCGC GGGGGTGA
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| Protein sequence | MGPHRFGGKG NQLARKLRVY EIAKELGLSN KEALDLCLAL GVDVKNHSSS VEEAHADRIR
RRAQRDHLGI YAEATTPQVA PPSAPTTPPS VREPEPVAAP EISEPVVASA PERRPDLAAV
IAEEAAKREE AEQAAIENAG RAPEQAAPRR QGPLSPSGNP IPPPPGGRPL SPSGKPIPPP
PRPQGPRDGR GRPAREGSGR PVGGSRPGAG RPGTGGGRPP MGGGIRPPAR GGGGVSTPRF
GGAAGAFAGR PGGGRGRGVR PNKSRRRISR KEFEELEPTR ATAYVPSNDP VPDYEVIIER
GSTAQEVAPK LNRSPGDLVR FLLMQGEMVT ATQSLTDEMI ELYAAELGAK VRLVDPGQEQ
EAQLAAKYLD VDETLDPTAE VVRPPVVTVM GHVDHGKTLL LDRIRHTNVV AGEAGGITQH
IGAYQVDVEG GRITFIDTPG HEAFTAMRAR GASVTDIVIL VVAADDGVMP QTVEAINHAK
AAGVPIIVAI NKIDRPDADP NRVMQQLSEH GLVPEAWGGD TITVQVSALQ SLGIDELLEQ
VLVLAEVLEL RANPTGRARG VVLEGHLDVG RGPVATVLVQ GGTLHVGDPV VAGQAWGKAK
ALISDRGEKV SDAGPSTPVQ VLGFSEVPSA GDPFRVTAEI SHAREIGEAR EQRLRLAANA
NRAVGAQGVR LEDIFEQIQQ GEVPTLNLIV KADVQGSLEA LSDALAKLSR DEVRLEIIHK
AVGGITENDV TLAAASHALI IGFNVRPDRR AREAAEVRHV EIRTYEIIYQ VIEDIEAAVV
GMLKPEFEEV VVGEAEVREV FRIPRVGAVA GCYVRNGTLT RGGRVRFLRD GVVLWKGTIS
SLRRFKEDVR EVQAGFECGV GLSDFQDLHA GDIIEAFELR EIPRG
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