Gene Afer_0629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0629 
Symbol 
ID8322689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp634275 
End bp634847 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content67% 
IMG OID644951768 
Productribosome recycling factor 
Protein accessionYP_003109256 
Protein GI256371432 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.701086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATC CAGTCGATAT CGATGCGGAG CTTGCGGCCT TCGAGGATCG CATGGCCAAG 
GCAGTGCGCC ACACCGAGGA GGAGTTCGCG ACCGTCCGTA CGGGTCGGGC GCAGGCGGCC 
CTGCTCGATG GGATCGTCGT CGAGTACTAC GGCGAGCGCG TTCCGTTGCG GCAGTTGGCG 
TCGGTGACGA CGCCCGATCC CCACAGCCTG CTCATCGCGC CCTATGACCG CAACGCGATG 
GGCGCCATGG AGCGAGCCAT TCGCGATTCA GACCTCGGCG TCAACCCGAC GAACGATGGC 
TCGGTGATCC GTATCGCGAT CGCGCCGCTC ACGGAGGAGC GTCGTCGAGA GCTCGTCAAG 
GTGGTGCGCA AGCGCGCCGA GGAGGGGCGG GTGGCGATCC GAGGCGTGCG CCGGCAGGCC 
AAGCAGCACT TCGAGTCGCT CCAGCGCCAA GGCTCGCTCA CGACGGACGA CCTCGCCGAC 
ATCGAGCGCA GTCTCGATCG CCTGACGGCC CGCTTTGTGG GCGAGCTGGA TCGAGCGCTC 
GAGGTCAAGG AGCACGACCT CCTCGAGGTC TAG
 
Protein sequence
MADPVDIDAE LAAFEDRMAK AVRHTEEEFA TVRTGRAQAA LLDGIVVEYY GERVPLRQLA 
SVTTPDPHSL LIAPYDRNAM GAMERAIRDS DLGVNPTNDG SVIRIAIAPL TEERRRELVK 
VVRKRAEEGR VAIRGVRRQA KQHFESLQRQ GSLTTDDLAD IERSLDRLTA RFVGELDRAL 
EVKEHDLLEV