| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0624 |
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| Symbol | |
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| ID | 8322684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 630128 |
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| End bp | 631126 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644951763 |
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| Product | integrase family protein |
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| Protein accession | YP_003109251 |
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| Protein GI | 256371427 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.995528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCGACC CGACCATGGG CCTGGCTCGG CTACCGGGCG AATTGGAGGG GAGTGCCTGC
GACAGGTGCC GATCGGCGGT AGCCTGGGCC CAGATGGTTG TGCCTGCACC AGAGACACGA
GCGAGAGGCT GGAGTCCGAG CGAGCCGCGG TGGCGGATCG ACGAGTTCCT CGCCGAGAAC
GTGCAGCTTC GACCCGCGAC GAGGCGACGC TACCGCGTCG TCCTTTCCAA CATCCAGGCT
CGAGCGGCGT CGCTCGGGGC GGCATCGCCG GCTCAGCTGG ACGCTCACGT GTTGCGGCGG
CTCCTTGCCG CTCCTGGGTC GAACGGGCCG TACGCGCCGG CGACTCGCGA TCTCGAGCGG
GTCGTGCTGC GGCGCTACCT CGTTTGGGAG GGAAGTGAAG GGGCACTCGC TCTCGCGGCG
CAGCTCGCTG CGTTTGCCAG GCGGCGCCCA CGGCCCTTGC CGCGCGGCAT CGACGAGACG
ACGCTCGGAT CGACCCTCGA CGGTCTCGAT GCTCGGGCGG ATGCGCGTGC GATGGCGATC
CTCGAGCTGG CCTATGCGAC GGGGTTGCGG GCGAGCGAAC TGTGTGCGCT CGATCGGAGC
GACCTCGGTC CGGGCGACCG GTGGCTGGTC GTGCGGGCCG GCAAGGGAGG TCGGACCCGC
CGGGTTCCGA TCGGCGAGGC TGCCCGGACG GCGCTCCGGG CCTACCTCGC CACGCGCGAC
GACGATGCCC CGGCACTGTT GCTCGGAGCC CGCGGGGCTC GACTCTCGCC GCGGGGGCTA
CAGCGGTTGA CCCGGCGCTA TCTCGATGTC CACCCGCACC AGCTGCGCCA TGCCTTCGCC
ACGCACCTGC TCGATCACGG CGCCGATGTG CGATCGATCC AGGAGCTGCT GGGGCATGCG
CGACTGGCGA CTACGGAGAT CTACACCCAC GTGTCGCGCG AGACGCTGAC GCGCGTCTAC
GATGCGACGC ACCCTCGAGC AGGGCGAGGA GAGGCATGA
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| Protein sequence | MRDPTMGLAR LPGELEGSAC DRCRSAVAWA QMVVPAPETR ARGWSPSEPR WRIDEFLAEN
VQLRPATRRR YRVVLSNIQA RAASLGAASP AQLDAHVLRR LLAAPGSNGP YAPATRDLER
VVLRRYLVWE GSEGALALAA QLAAFARRRP RPLPRGIDET TLGSTLDGLD ARADARAMAI
LELAYATGLR ASELCALDRS DLGPGDRWLV VRAGKGGRTR RVPIGEAART ALRAYLATRD
DDAPALLLGA RGARLSPRGL QRLTRRYLDV HPHQLRHAFA THLLDHGADV RSIQELLGHA
RLATTEIYTH VSRETLTRVY DATHPRAGRG EA
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