Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0574 |
Symbol | |
ID | 8322633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 578672 |
End bp | 579226 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644951712 |
Product | transcriptional regulator, AsnC family |
Protein accession | YP_003109201 |
Protein GI | 256371377 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0164952 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCAGC GTCGTGAGCC GTCTGTGCGG GCCTTCCCCA TGATTCGTGG CCAGGGCTTC CTCACTGCCG ATCGAGCCGA GCGCAACGGG GATGGGGAGC GGGCGCCCGT CCAGCTCGAT GCCATCTCGA AGCAGTTGAT CTCCCTGCTG CAGGTGGATG GACGCGCGTC CTATGCGGCG CTCGCCAAGC AGGTCGGGCT CAGCGAGGCT GCGGTTCGCC AGCGTGTCCA GCGTCTCGTC GAGTCCCAGG TCATGCAGAT CGTCGCCGTC ACGGACCCGA AGATGGTCGG GTTTCGTCGT CAGGCGATGG TGGGCATCCA GGCCGTCGGC GATCTCGAGG CGTTGGCATC GCAGTTGGCG GCGATTCCCG AGGTCATCTA CGTCGTGATC GCAGCCGGCA GCTTCGACCT GCTGGTCGAG GTGGTCTGTG AGGACGACGA TCATCTGCTG CACCTGTTGA ACACCGAGAT TCGTCCACTC GAGGGCGTGC GATCGTCGGA GGTGTTCGTG TATCTCCGGC TGGAGAAGCA GACCTACAGC TGGGGAACTC GCTAG
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Protein sequence | MAQRREPSVR AFPMIRGQGF LTADRAERNG DGERAPVQLD AISKQLISLL QVDGRASYAA LAKQVGLSEA AVRQRVQRLV ESQVMQIVAV TDPKMVGFRR QAMVGIQAVG DLEALASQLA AIPEVIYVVI AAGSFDLLVE VVCEDDDHLL HLLNTEIRPL EGVRSSEVFV YLRLEKQTYS WGTR
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