Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0571 |
Symbol | |
ID | 8322630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 574304 |
End bp | 575689 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644951709 |
Product | ATPase |
Protein accession | YP_003109198 |
Protein GI | 256371374 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.195341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTGACA TGGAGCGCAT CATGAACCCG TACACCCCGG GTGCTGGGGA TCGCCCACCG GTGCTCGTCG GTCGTGAGCG CCAGCTCGCC CTCGCAGAGG CCATGCGCCA GCGCATCGAA CACGGCTTCT CGGCACCACC GACGTTCTTC GTGGGTCTCC GGGGAGTCGG CAAGACAGTG CTGCTCCGGG AGATCGCTGA CCAGTTTCGA CGGCATGGCT GGCTGGTTCC CTACGCGGAG GCCCGCCGAG GTGCTTCGGT GGCTCGGATG CTGGTGACCT ACGTGCACGA AGCCGAGAAC TCTGCGCCCG TGAAGGGACG CCTTCGTGAG GCTCTGGCCC AGTTGGTGCG CCGCGGTGGT TCAGTGGAGG CTCTTGGCGT GGGGGCGACG CTGGGGCCAG AGACCGTCGA CTCGACGACA CGCGCTGCCC AGGATCTCGA GCACATGCTT CGCAGCCTTG GTGAGGCGGC CAAGAGCGAC AGGGTGGGCG TGGCCATGCT CATCGACGAG GTCCAGACTC TCTCGTCCGA GACCGTCCGG GAGCTCATCT GGGTCGTCCA GAAACTTCGC CAGGACCTAC CCATCGCTCT CATCGGCGCA GGGCTCCCGC ACCTTGCCAG CGTCCTCGCC AGCGCGGTCA CCTACGCCGA CCGCTTCCGC TACGAGAGTA CGGACAACCT CGATGACACG GACGTACGAG CTGCGGTGCG TGGGCCCGCT CACGAGCGCC TGGTCGAGTG GAGCGACGAC GCACTCGACC TGTTGTGCAC GATCGCCAAG GGCTACCCGT ACGCCGTGCA GCTGTGTGCC TACGAAGCCT GGGAGCAGGC GGCTCGCCCG GGCGACCCTC GGCAGTGGGT CGCGATGCCG TTGTCGGCCC AGTGGGCGGT CTCGGAGTTC GGGGAGCGCG TTGGACCCCC GTCGGTCGAG GGCCAGCAGG TGCATGCCAT CACTCGCTCG CACCTCGATG CCGCGATGCC GCGCATCATC GACCAGATGC GCGCGGGCCT GTTCCGCTCA CGCTATGACG GGCTGACCCC GAAGCAGTTC GCCTACGTCG AGGCCATGCT TGCGGAGCTC GAGCCCGACT CGACGGCTCC CGTCTCGGCC ATCGCCCAGC GCCTCCGCGC GTCGCTGAGT GCGCTGTCTC CCGTGCGCGA TGCCCTCATT AGGAAGGGTG TCATCTATGC GCCGGGGCGC GGCCGGGTCG CCTTTGCCGT ACCCTGGTTC GCGAGCTTCC TGGCAGAGGA GATCGTTGCG ACCGAGCCGA GCAGCTATGA AGCGATCCTT CCCGGGCTTC GTGCTCGCGG CGTCGACCTC GAGCCTCCAG GCGGTTCCAC CGGTGCCCCT CGATCGCCGA CTCCACCTCT GCAGTCCTCT GACTAA
|
Protein sequence | MVDMERIMNP YTPGAGDRPP VLVGRERQLA LAEAMRQRIE HGFSAPPTFF VGLRGVGKTV LLREIADQFR RHGWLVPYAE ARRGASVARM LVTYVHEAEN SAPVKGRLRE ALAQLVRRGG SVEALGVGAT LGPETVDSTT RAAQDLEHML RSLGEAAKSD RVGVAMLIDE VQTLSSETVR ELIWVVQKLR QDLPIALIGA GLPHLASVLA SAVTYADRFR YESTDNLDDT DVRAAVRGPA HERLVEWSDD ALDLLCTIAK GYPYAVQLCA YEAWEQAARP GDPRQWVAMP LSAQWAVSEF GERVGPPSVE GQQVHAITRS HLDAAMPRII DQMRAGLFRS RYDGLTPKQF AYVEAMLAEL EPDSTAPVSA IAQRLRASLS ALSPVRDALI RKGVIYAPGR GRVAFAVPWF ASFLAEEIVA TEPSSYEAIL PGLRARGVDL EPPGGSTGAP RSPTPPLQSS D
|
| |