Gene Afer_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0560 
Symbol 
ID8322619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp563311 
End bp564051 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content70% 
IMG OID644951698 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_003109187 
Protein GI256371363 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGACGA TGGAGACCTC GGGACCGCTG CGCACCATCA CGATCGCGAA CCCCACCAAG 
GCGAACGCCC TCGGCATGGA GGACTTCGGC GACCTCGCGG ATCTCCTGGC CGAGATCGGG
TCCGATGCCG CCGCCGCCTG CGTCGTCGTG CGCGGGAGCG GCAAGCACTT CTCCGCAGGG
ATCGATCTCG ATCTGCTTCG AGGTCTCGGC GCTACCCCAA GTCCCGAGAC GATCGGCATG
CTCCAGCGCG GGTTCCTCGC GCTCGCCACG CTTGAGATCC CCACCATCGC CGCCATCGAC
GGCGCCTGCA TCGGTGCGGG CCTCGAGCTC GCGCTCGCGT GCGACGTTCG CATCGGGACG
CGGTGGGTGC GTTGCTCACT GCCGGAGGTG CGCTTCGGTA TCGTCGCCGA TCTCGGAGGA
CTCAGCCTGC TCCCAGAGGT CGTCGGTACG CACCGTGCCC TCGCCCTCGC CCTGGGGGCA
GGCGAGCTCG ACGCGAACGA AGCGCGAGCG TACGGCATCC TCGACGACGT CGTGGCGGAC
GACGCCGAGC TCGCCCGACG CGTCGATGCC GTGGCCGCCC AATTTCTCGC CGCTCCCACC
GAGGCCCAGC GTGCCACGAA GCGCCTCGTG ATCGCCGCCC GACGAACGCG CATGGAGGCC
GAGCTTGCGC AAGCCGCGCT CGCGAACGTC CAGCTCATGC GCGCTCGGTC ATCCTCCAGC
GAACCTCCCA CAGGAGCCTA A
 
Protein sequence
MLTMETSGPL RTITIANPTK ANALGMEDFG DLADLLAEIG SDAAAACVVV RGSGKHFSAG 
IDLDLLRGLG ATPSPETIGM LQRGFLALAT LEIPTIAAID GACIGAGLEL ALACDVRIGT
RWVRCSLPEV RFGIVADLGG LSLLPEVVGT HRALALALGA GELDANEARA YGILDDVVAD
DAELARRVDA VAAQFLAAPT EAQRATKRLV IAARRTRMEA ELAQAALANV QLMRARSSSS
EPPTGA