| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0527 |
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| Symbol | |
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| ID | 8322586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 531522 |
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| End bp | 532361 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644951672 |
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| Product | ribosomal RNA adenine methylase transferase |
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| Protein accession | YP_003109161 |
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| Protein GI | 256371337 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
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| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.486138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCCAG TCACGAAGCG GGAGATCGTC GCACACCTCG AGCGCATCGG GCTCGAGCCC
TCCAAGGCCC TCGGCCAGAA CTTCCTCACC GACGGCAACA TCGCGCGCAA GGAAGCAGCG
CTGGCCGCGG AGGCGGGGCT TCGGGTCGCG GTCGAAGTGG GGCCGGGCCT CGGCTCGCTC
ACCGTGTGGC TGGCCGAGTA CTTCGACGAG GTGGTGGCGC TCGAGGCCGA CCGACGACTG
ATCCCGGCGC TCGGCGAGGT GCTGGCCGCG CGAGGGATCG ACAACGTCCG AATCGAGCAC
GCCGATGCGC TCGCCGACCC GCTCCCGCTG GAACGACGCC CCAGCGCGCT GGTCGCGAAC
CTCCCCTACC ACTCCGGCTC ACAGATCCTC GTTCGCCTCG TCGAGGAGGC CTGGTTCCTC
GAGCGTGTGG TCGTCATGGT CCAGGCGGAG TTCGCCGACC GCATCGTCGC TGCCGCCGGC
ACCCGAGCGT GCTCGGCGCT CGGGGTGCGG CTCGCGCTCA GCATCGACGC GCACGTCGCC
GCCAAGGTGC CACCGGTCGT CTTCCACCCG CAGCCGACGG TGTGGTCGAA GCTCGTCGTC
GCCGATCGCC GCAGCGAGCC GCTCGCGGTG ACCGAGCCCA CGACCTTCGA CGCCACGGTG
CGTGCGATCC GCCACGGCTT CGAACGTCGG CGTCAGATGC TCCGACGCGC CCTCGGCGAC
GACGAGCTGG CGGCGCTCGA TGCCGTCGGC ATCGACCCCA TGCGCCGCGC CGAGTCGCTC
GCGCTCGACG AGTGGGTCGC GCTGGGGCGC GCCATCGCAA CCTCGAAGGG TGCCCGGTGA
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| Protein sequence | MRPVTKREIV AHLERIGLEP SKALGQNFLT DGNIARKEAA LAAEAGLRVA VEVGPGLGSL
TVWLAEYFDE VVALEADRRL IPALGEVLAA RGIDNVRIEH ADALADPLPL ERRPSALVAN
LPYHSGSQIL VRLVEEAWFL ERVVVMVQAE FADRIVAAAG TRACSALGVR LALSIDAHVA
AKVPPVVFHP QPTVWSKLVV ADRRSEPLAV TEPTTFDATV RAIRHGFERR RQMLRRALGD
DELAALDAVG IDPMRRAESL ALDEWVALGR AIATSKGAR
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