| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0503 |
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| Symbol | |
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| ID | 8322562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 507051 |
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| End bp | 508340 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644951654 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_003109143 |
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| Protein GI | 256371319 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.369072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGGA ACCGACAGGG GACTCGCCGG TGGCGGACCC GTGGCATGGC GGCGGGGCTT
GCTGCGCTCG GATCTCTGGC GCTCGCAGCA TGCGGGTCGA GCTCGTCGGC CAGCTCGGCG
AGCTCCTCTG GCAAGCTGAC CGGACCGATT CAAGCCGGCA TCCTTCTGCC GATGAGCGGC
AAGGAGGCGT TCGTCGGACA ATGGTTCGAC CACGGCGTGC TCGCGGGCAT CTACGCGGTC
AACCACGGTG GCGGCGTACT CGGCGCGAAG ATCACCTCAC AGCTCGAGGA CACTGCGGGG
GACCCTGTGG ACGCAGTCAC GGCGCTCCGG ACGTTGCTGC TCAAGAAGCC GGTCGTGGTC
TTTGGACCGT CCTCGCTCGA GATCGAGGGC GTGATCCGGG ACTTCGGTCC TGACCACGTG
GTCGATCTCA TGGAAGGCGG CACGACGCAG CTCGACTACA TGCGCTACCC ATACGTCTAT
CGAGTGTTCC CGTCAGACTC TGAGCTCCTG TCGGGCGAGG CCTACTACGC CTACACGGCC
AAGCACTGCA CCCAGGCGGC AGAAGTGTAC GACTCCGGGC CGAACGCGCA AGCCGAGGTT
GGACCAGTGA CCCGTGCGTA CGAGAAGCTC GGTGGCAAGA TCGTCGCTTC CGAGACGATC
GTGGCGGGCC AGAGCTCCTA CCTGTCGGTC GTGGCCAAGA TGTTCTCAGG TGCACAGCCG
GGATGCGTGT TCTTCCACAT GGATCCGCAG ACAGCGAGCA CCTTCTTCGC CAACGTCAAA
CAGCTGGGGC ATCTCAACAT CCCCTACATC ACGGGCGACA CGGGTGCGTC ACTGCAGATG
GCTCAGGCGA TGGGACTCTC CAATGCGTCT CGATGGCTGA CCGGCATGGC GGCGCCTCCG
GGATACGCCC AGTCGAACAA GGCCTTCCTG TCGGCCTACG AGGCGGTGTG GCACACCAAC
CAGCCCCTGC CGGCCTCCCC GGCAATGTAC GACGCGGTGA TTATCGCGGC ACTCGCCATG
GATGCAGCCC ACTCGTCCAA TCCCACGGTG TGGCGGCCCT ACATCACCAA GGTCTCGAAC
CCTCCTGGGA TCAAGTGCTA CAGCTACACC AGCTGCGCAA CACTCCTCAA AGAGGGCAAG
AAGATCAACT ACGAGGGCGC GAGTGGCAAC GAGAACTTCA ACCAGTACCA CAACGTCTTC
TCCTCCTTCG AGGTGGTGCA GTTCACCCCG AGCGGCAACT TGAAGACGGT GTATCTGGAG
CCGGCCTCAA CCCTCGCACG GCTGTACTAG
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| Protein sequence | MQRNRQGTRR WRTRGMAAGL AALGSLALAA CGSSSSASSA SSSGKLTGPI QAGILLPMSG
KEAFVGQWFD HGVLAGIYAV NHGGGVLGAK ITSQLEDTAG DPVDAVTALR TLLLKKPVVV
FGPSSLEIEG VIRDFGPDHV VDLMEGGTTQ LDYMRYPYVY RVFPSDSELL SGEAYYAYTA
KHCTQAAEVY DSGPNAQAEV GPVTRAYEKL GGKIVASETI VAGQSSYLSV VAKMFSGAQP
GCVFFHMDPQ TASTFFANVK QLGHLNIPYI TGDTGASLQM AQAMGLSNAS RWLTGMAAPP
GYAQSNKAFL SAYEAVWHTN QPLPASPAMY DAVIIAALAM DAAHSSNPTV WRPYITKVSN
PPGIKCYSYT SCATLLKEGK KINYEGASGN ENFNQYHNVF SSFEVVQFTP SGNLKTVYLE
PASTLARLY
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