| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0452 |
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| Symbol | |
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| ID | 8322511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 451746 |
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| End bp | 452804 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644951604 |
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| Product | sortase family protein |
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| Protein accession | YP_003109093 |
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| Protein GI | 256371269 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGGGA AGGGCCGGGG AGCGCACAGC CGACAGCGAG GTCGGGGAAT CGCGATCGTA
GGGGTCGTGG CGATGCTCGC TGGTCTCGGC CTCATCGGCT CGATCGTCGC CTTCTACGTG
CGCTCCTCCC TTGTGGGTGG CGGACTCATC CAGCAAGCGC AGAAGGCCCG GACGGTCGCG
GCGTGGCCGC GATCGCTGCT CGCGATCGTG CGTATCCCCT CGATCGGGCT CGTCGCGCCG
GTGGAGCAGG GCACCGGCCA GTCGGTGCTC GCTGTGGCGG TGGGTCATCT CACGACGAGC
GCGCTCCCTG GGAAACCAGG CACGTCGGTG CTCGCGGCGC ACAACGTCAG CTGGTTCTCG
GGCCTCGGTG GTCTCGGCTC GGGATCTCTC ATTGAGGTCG ATACACCGTA CGGGCAGCAG
GTCTATCGTG TGGCCTGGCA TCGCGTCGTG CACGTCGGTG CGCCCGTGGC CAACACCGCC
GCACCGACTC TGGTGCTCGA AGCGTGCTGG CCGCTCAATG CGCTCTACTT GACGCCCGAG
CGCTACCTCG TTGGTGCCAC CTTGGTGGCG ACGACGAAGA TCGCGGTCAC GCCGGTCACG
CCGTCGTCGG ACAGCTACCA GCCGCTCGGG CTTGCGCCGA CGCTCGCGCA CGAGAACCTC
TCGCTCGCGG CCAACGACCT ACCGATGGGG GTGCTCGCCA CCGTTGGCTC GCCTGCTGCA
GCATGGACGA GTTCACAGCG ACCCTACAAC TTCGCTGGAG CGGAAGTGAC GTGGACCATT
GCGTTGTTGC ATGCGCTCGA AGCTCACGAC CTCGTGCTCG TCGAATCGGT GACCCACGAG
CCAGCAAGCG TGGTCGCACC ATTGCTCAGC TGGGACGGAG GCTTCGCGAG CCTCGACGAC
CTCACCGAGG TCGTCGATGG TGTCACGGCG TCGGCTGGCT CCTCGCGAGT GTCGCTCCAG
ACCGATCACG GGCCGCTCGT CGTTACCTTG CGTTTTCGGG TCATCGGGCA TGGGGTCGAG
GTAGCTGGCG CTGCGGTCGG GACGTCGCAG GGCTCGTAG
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| Protein sequence | MRGKGRGAHS RQRGRGIAIV GVVAMLAGLG LIGSIVAFYV RSSLVGGGLI QQAQKARTVA
AWPRSLLAIV RIPSIGLVAP VEQGTGQSVL AVAVGHLTTS ALPGKPGTSV LAAHNVSWFS
GLGGLGSGSL IEVDTPYGQQ VYRVAWHRVV HVGAPVANTA APTLVLEACW PLNALYLTPE
RYLVGATLVA TTKIAVTPVT PSSDSYQPLG LAPTLAHENL SLAANDLPMG VLATVGSPAA
AWTSSQRPYN FAGAEVTWTI ALLHALEAHD LVLVESVTHE PASVVAPLLS WDGGFASLDD
LTEVVDGVTA SAGSSRVSLQ TDHGPLVVTL RFRVIGHGVE VAGAAVGTSQ GS
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