Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0366 |
Symbol | |
ID | 8322421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 374421 |
End bp | 375674 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644951514 |
Product | NADH dehydrogenase I, D subunit |
Protein accession | YP_003109007 |
Protein GI | 256371183 |
COG category | [C] Energy production and conversion |
COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCCACGTC GGCCGCGGAG CTCGAGCGAG AGCAGGGCGC GGTGCTCCGG GTTCCCGAGA GCGAGGTCGA TCTCGAGGGG TTTCGAAGCC GACGACCGGA TGATCATCAA CATGGGCCCC CAGCACCCGT CGACCCATGG GGTGCTGCGC ATCATGCTCG AGATCGAGGG CGAGACGGTG CTGCGTTCGA AGCCTGTCAT CGGCTATCTC CACACCGGGA TGGAGAAGAC GGCAGAGACG CTGACCTACC TCCAGGGCAC GACCAACGTG ACCCGTATGG ACTATCTGTC ACCGCTCAAC AACGAGCTGG TGTACTGCCT CGCGGTGGAG GACCTGCTCG GTCTCGAGCT GCCGGAGCGG GCGATCTGGA TCCGCATGCT AATGTCCGAG CTCAATCGCA TCGCCTCGCA CGTCATGTGG ATGGCGACCA ACGGCATGGA CCTCGGGTCG ACGTCGATGA TGATCTTCGG GTTCCGTGAC CGCGAGATGG TGCTCGCCTT CTTCGAGAAG GTGACCGGCC TGCGGATGAA CAACAACTAC ATGCGACCCG GTGGGGTCGC GGCCGACCTT CCCGACGGGT GGGAAGACGA CGTCTCGGCG ATCGTTGACA CCATCGAGCG GCGCGTGGAG GAGTACCACG AGCTGTTGAC CGGTCAGCCG ATCTTTCGCA AGCGCGTGGT CGGGGTCGGG ATCATCAAGC CCGAGGAGGC GATCGCGCTC TCGGCTACCG GTCCGATCCT GCGCTCGACT GGAGTCGCGT GGGATCTGCG TCGGTCGATG CCGTATCTCG CCTACGACCA GGTGGACTTC GACGTGGTCG TCGGCACGGT GGGCGACACC TGGGATCGCT ACATGGTGCG CATCAACGAG ATCTTGCAGT CGATCCGGAT CGTGCGCCAA GTCGTCGAGC GCATGCCATC GGGACCGTAT CGAGCGCAAG ATCCGAAGGT CACGCCGCCG CCGCGTGCGC GTATCGATGA GTCGATGGAG GCGTTGATCC ACCACTTCAA GCTCTACACG GAGGGCATTC GGGTCCCCGC AGGCGAGACG TACGCGGCGA TCGAGTCTCC TCGTGGAGAG ATCGGTTGCT ATCTCGTCTC GGACGGGTCG GCGCGTCCCT ATCGGATGCA CATCCGAGGG CCGTCGTTCG CGAACCTCCA GAGTCTTCCG GTCATGCTGC GTGGCGCACT GATCGCCGAC GCGATCGCGA TCACGAGTTC TGTCGACCCG GTCATGGGGG AGGTAGACCG CTAA
|
Protein sequence | MPRRPRSSSE SRARCSGFPR ARSISRGFEA DDRMIINMGP QHPSTHGVLR IMLEIEGETV LRSKPVIGYL HTGMEKTAET LTYLQGTTNV TRMDYLSPLN NELVYCLAVE DLLGLELPER AIWIRMLMSE LNRIASHVMW MATNGMDLGS TSMMIFGFRD REMVLAFFEK VTGLRMNNNY MRPGGVAADL PDGWEDDVSA IVDTIERRVE EYHELLTGQP IFRKRVVGVG IIKPEEAIAL SATGPILRST GVAWDLRRSM PYLAYDQVDF DVVVGTVGDT WDRYMVRINE ILQSIRIVRQ VVERMPSGPY RAQDPKVTPP PRARIDESME ALIHHFKLYT EGIRVPAGET YAAIESPRGE IGCYLVSDGS ARPYRMHIRG PSFANLQSLP VMLRGALIAD AIAITSSVDP VMGEVDR
|
| |