Gene Afer_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0287 
Symbol 
ID8322342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp296576 
End bp297271 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content70% 
IMG OID644951436 
ProductFMN-binding negative transcriptional regulator 
Protein accessionYP_003108929 
Protein GI256371105 
COG category[K] Transcription 
COG ID[COG2808] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00581464 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATTC ACCCGTGGGA CGCAGCCACC AGCGAGGACG AGTGGCGTCG TTGGCTCGCC 
GAGCACGAGC CGTTCGGCGT CCTCGCCGTC GCCAACCTCG ACCCCGACGA GGCTCCCCTC 
GTCCTGCCGC TCCACCTCTC CCTCGTCGAC ACCGTGCTCG TTGCTCATCT CGCGCGCACC 
AATCCCGTAT GGCCACACCT CGAGCGAGCC ACGCGCGTGC GCGTCGCGTT CCACGGCGAC 
TACGCGTTCA TTCCGGGCTA TTGGCGCGCG CCAGATGCGA CGGCCCCGGC AGACGGCGTG 
CCGACGAGCT ACTACAGCGC CGTTCAGTTC GTCTGTCGAC CACGCATCGT CGACGACCCC 
GAGGCAAAGG CGGCGATCCT CGAGCGCCAG CTCGGCGATC TCCAGCCCGA GGGTCGTCAC 
GCTGCCGTCG TCCCCGGCGA GCCGCCCTAT GGCACCATGC TCGGCGCGAT CCGAGCGCTC 
GAGCTCGAGA TCGTCGAGGT CAGCGCCAAG TTCAAGTACG ACGATCAGAA GCCGGTCGAG 
CTCCGTGATG CGGTGAGCGC GGCTCTCATC GAGCGCGACC ACGGCCTCGA TCGCGCCGCC 
GCCTCCCAGC AGCGACGTCG ACTGGCGCTG CTCGGCGCCT GGCGAACACA CGCACGCTCG 
AGCGCGCCGA GCAGCGACCA GACGCCTCGC GCCTAG
 
Protein sequence
MLIHPWDAAT SEDEWRRWLA EHEPFGVLAV ANLDPDEAPL VLPLHLSLVD TVLVAHLART 
NPVWPHLERA TRVRVAFHGD YAFIPGYWRA PDATAPADGV PTSYYSAVQF VCRPRIVDDP 
EAKAAILERQ LGDLQPEGRH AAVVPGEPPY GTMLGAIRAL ELEIVEVSAK FKYDDQKPVE 
LRDAVSAALI ERDHGLDRAA ASQQRRRLAL LGAWRTHARS SAPSSDQTPR A