| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0233 |
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| Symbol | |
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| ID | 8322286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 236735 |
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| End bp | 238144 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644951380 |
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| Product | peptidase M20 |
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| Protein accession | YP_003108875 |
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| Protein GI | 256371051 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.159664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTTG CGGACCCTGT GTGGGTGCGC CGATGGCTCG AGGATCACGG TGTCGCGTTC
CTCGAGCGCT TCGTCGCCCT GAACAGTCTC TCACCTGCGT TCGATCCGGA GTGGGAGCGC
CACGGCACGC TCGCCGCCGC GATCGACCTC GCTGCGGAGA CGGTCGAGGC CGCTGGTTTC
GAAGGAACCG AGATCGTGCG CCAGACGATC CCCGGCCGAT CGCCCGCCCT GGCGGTGCGC
ATCCCCGGGC GCGGGCACGG TACCGCCCTC GTCTACGGCC ATCTGGACGT GCAGCCGGCC
GTCGGCCCGT GGCGTGACGG GAGCGATCCC CATCGTGTGG TGCGTCACGG CGAGAGGCTG
GTTGGCCGCG GCGTGGTCGA TGACGGCTAC AGCGTCGTGG CGGTTCTCGC CGCACTCGAG
GGACTGCGGG CGATGGGCGC GGATGCCCCG ACGGTGTGGG CACTCTTCGA GACCTCGGAA
GAGAGCGGGA GCCCGGACCT CGATGCGCAC CTCGACGCCC TCGCCCCGAC CATCGGCCCG
GTGGACCTCG TCGTCTGCTT GGACGCAGGC GGTCTCGACA CAAAGCGGCT GTGGCTGACC
TCGTCGCTTC GGGGCAACCT CGTGGTCGTC GTCGACATCG CCGTGCTCGA CCATGGCATC
CACTCCGGTG AGGCTGGAGG GGTCGTACCG GAGACCTTCC GGATCCTACG GGCCCTGCTC
GAGCGGCTCG AGGATCCCGT CACCGGCGAC ATTCGTGTCG ATGCCCTGCG ATCTGCGGTC
CCCGAGCCCG TGCGTGAGGC GGCCCGCGCC CTCGTCGAGG CGCTGGGAGA TCCGTTCGCC
GGTGCCTACC CCCTCCTCGA GGGCGTACGC CTCGAGGGGG CGGACCCGGT CGAACGACTG
CTCCGCCAGA GCTGGGGCAC GGCGATCGCG CTCACCGGCA TCGACGGGGT GCCGAGCGTG
GACACGGGCG GCAACGTGCT GCGCCCGTCA CTCACCGCCA AGCTGTCGGT GCGCATCCCA
CCCGACGTCG ATGCGGTCCG CGCCCTCGAT GCGTTGGTGG CGACCCTGAG CGCCGATCCT
CCCAACGGCG CGCGTGTGCG CGTCACGCCG GAGGCCCCCG CGCAGGGCTG GGCGGGGGCG
GCCCTCCCGG ACTGGCTCGC CGATGCGCTG GCTCGCGGGT CGATCGCGAG CTTCGGTGAG
CCCCCGCGAT CGGTGGGGGT CGGTGGGTCG ATCCCGTTCC TCGCGTCGCT GGGCGAGCGC
TTCCCTGGCG TACCGATCGT CGCGACCGGA GCGCTCGCCC CGACGTCGAA CGCGCACGGG
CCCGACGAAG TGCTCGAGCT GCCGGCCGCG ACCGGCGTGG CGGTCAGCCT GGCCGAGGCG
CTCGGCGCAC TCGCTCAGCG ATCGTTCTGA
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| Protein sequence | MTLADPVWVR RWLEDHGVAF LERFVALNSL SPAFDPEWER HGTLAAAIDL AAETVEAAGF
EGTEIVRQTI PGRSPALAVR IPGRGHGTAL VYGHLDVQPA VGPWRDGSDP HRVVRHGERL
VGRGVVDDGY SVVAVLAALE GLRAMGADAP TVWALFETSE ESGSPDLDAH LDALAPTIGP
VDLVVCLDAG GLDTKRLWLT SSLRGNLVVV VDIAVLDHGI HSGEAGGVVP ETFRILRALL
ERLEDPVTGD IRVDALRSAV PEPVREAARA LVEALGDPFA GAYPLLEGVR LEGADPVERL
LRQSWGTAIA LTGIDGVPSV DTGGNVLRPS LTAKLSVRIP PDVDAVRALD ALVATLSADP
PNGARVRVTP EAPAQGWAGA ALPDWLADAL ARGSIASFGE PPRSVGVGGS IPFLASLGER
FPGVPIVATG ALAPTSNAHG PDEVLELPAA TGVAVSLAEA LGALAQRSF
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