| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0232 |
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| Symbol | |
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| ID | 8322285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 235305 |
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| End bp | 236723 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644951379 |
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| Product | Amidase |
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| Protein accession | YP_003108874 |
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| Protein GI | 256371050 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.226202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGACCA TCGATCTCGC TGCGTATGTC GACGGCGTGA GCCTTGCGGC CGCGTTGCGC
CGTCGCGAGG TGGGCGTCCT CGAGGTGCTC CAGGCGACGC TGGAGCTGAT CGACGAGCGC
AACCCGGCGC TCGGGGCGAT CGTGTGGCTG GACCGAGACG ACGCCCGCCG CCGGGCGGAG
CGGGCGGCTC GGCGCCTCGA CGCCGACGAC CCCGCACCGT TCCTCGGAGT CCCGCTGCCA
GTGAAGGACC TGCACCCGGT TGCGGGATGG CCGATCACCT ACGGCTCGTG GGGAGGTCCG
GAGGGGGTGA GCGCCCGGAG TTCGATCGCC GTGGAGGCGC TCGAAGAGGC TGGGTTCGTC
CTGGTCGGGC GCAGCGCGAC ACCGGAGCTC GGCGAACTGC CCGCGACCGA AGGGGATCGC
TACGGGGTCA CGCGGAACCC GTGGGACCTG TCGCGCACCC CTGGCGGCTC GAGCGGTGGT
GCGGCAGCAG CCGTGGCCGG CGGCATGGTC ACCGTGGCCC ATGGTTCGGA CGGTGGCGGA
TCGCTCCGGA TCCCCGCCGC TGCGTGCGGG CTCGTGGGGC TCAAGCCGAG CCGAGGTCGT
GTGCCGGCGC GCTCGGCCCC CTGGTTCGGT CTCTCGACGG AAGGTGTCGT GACGCGCAGC
ATCCGTGACC AGGCGGCCTG TCTCGCGGTG CTCGCCGCTC CGCGTCGCGG TGCCTGGCTC
CCGCAGCCGC CCGCTGGGTT CGGCGACGGT GGCTGGCACG TGGCGCCGAC GCGCCTGCGT
GTGGGGGTCG TCACCGAACC ACCGTTCGGC CTCCCGATCG ACGATGCCCG GCGGCTCGCG
GTCGGCGAGG TTGCGCGTCT CGTCGCCGAT CTCGGCCATG AGGTTCGGGA GGTGACCCTC
GCGTTGCCCG ACGAGCTGAT CGAGGCCGTC TCGGTGGTCG TTGGGGCAGG CGTCGCCGAG
CACGACGATC TCGATTGGAG TCGGGTCGAG CCCCATACGG CGGCCGAGTA CGAGCGGGCG
AAGGCGTTGC CGGCGACCGA GCTGGTTCGC CAGCTCATGG TGCTCGAGCG CACGGGCTCA
GACCTCGCGG CAGCCCTGCC AGGCGACGTC GACGTGCTCC TCACACCGAC GACAGCGATC
GCCCCTCCCC CGGTCGGTAC GGTGCTCGAA GCGGCGCATG CGGCCGCCCA CACCGGCCTC
CCTGCGCTCG AGGTGGTGTC GCTCGCGATC TTCACCCTGC CGTGGAACAT CGCTGGCCTG
CCGGCGATCT CGCTCCCGAC GCACCTCGAC GTCGATGGCT TGCCCATCGG CGTCCAGCTC
GTCGGACCGC CCGCTGGCGA GGCGACGCTG CTCGCGCTCG GGGCGGCACT CGAGGAGGTC
TACGAGTGGA CCACCCGACG ACCTCCCGTT CAGCGCTAG
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| Protein sequence | MSTIDLAAYV DGVSLAAALR RREVGVLEVL QATLELIDER NPALGAIVWL DRDDARRRAE
RAARRLDADD PAPFLGVPLP VKDLHPVAGW PITYGSWGGP EGVSARSSIA VEALEEAGFV
LVGRSATPEL GELPATEGDR YGVTRNPWDL SRTPGGSSGG AAAAVAGGMV TVAHGSDGGG
SLRIPAAACG LVGLKPSRGR VPARSAPWFG LSTEGVVTRS IRDQAACLAV LAAPRRGAWL
PQPPAGFGDG GWHVAPTRLR VGVVTEPPFG LPIDDARRLA VGEVARLVAD LGHEVREVTL
ALPDELIEAV SVVVGAGVAE HDDLDWSRVE PHTAAEYERA KALPATELVR QLMVLERTGS
DLAAALPGDV DVLLTPTTAI APPPVGTVLE AAHAAAHTGL PALEVVSLAI FTLPWNIAGL
PAISLPTHLD VDGLPIGVQL VGPPAGEATL LALGAALEEV YEWTTRRPPV QR
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