Gene Afer_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0197 
Symbol 
ID8322250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp202283 
End bp203239 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content68% 
IMG OID644951344 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_003108839 
Protein GI256371015 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCGG TGCTGATCCA GCGCCACGGC GGCCCAGAGG TGCTCGAGAT CGCCGACGTC 
CCCGAGCCGC ACCCCGCCCC CGGTGAGGTC GCGATCAAAC TGGAGGCGAT CGGCGTCAAC
TACATCGACC TCTACCACCG TGAAGGCTGG TATCCCCTCT CGCTCCCGAC CGTCCTGGGC
AGCGAAGGCG CGGGCACGGT CATCGAGGTC GGTGAAGGTG TCACCTCCGT CAGCATCGGC
GATCGCGTGG CCTTTGCCAA TCATCTCGGC GCCTACGCAG AGGTGGTGGT CGTCCCGGCT
GGTCGGCTCG TCACGATTCC CGACGACGTC ACGGCCGATG TCGCCGCCGC GGTGCTGCTC
CAGGGCATGA CCGTCCATGC GCTCGTCAAC TCCTGCGCTC GAGTGGAACC GGGTGCGACG
GTTCTCGTGC ACGCAGCCGC AGGCGGCGTG GGTTCCCTGC TCGTGCAGTA CCTCGTCCGT
CGCGTCGCGT CCACGGTCGT GGCGACGGCC TCGACCGCGG AGAAGCGAAC CCGTGCCCGT
CGTCTGGGCG CTCAGATCGT GACCGACTAC GACGGATTCG TCGATGCCGC TCGTAGGCTC
GGTGGGGTAA GCGTTGCCTT CGACGGTGTC GGCCGTGCGA CGTTCGATGG ATCGCTCGCG
GCGCTCGCAC CCAGAGGGAT GCTCGTGCTC TATGGACAGG CGAGCGGCCC GGTGCCGCCC
GTCGATCCCC AGATCCTGAA CCGGCAGGGA TCGATCTTCC TCACGCGCCC GTCGCTGCCG
CACTACGTCG CGACGCCCGA GGAGCTCAGA TGGCGCGCTC AGGCGATCTT TGCCGATGTC
GCCGCTGGCC TCCTCGAGGT GACCATCGCC GAGCGCATCC CCCTCGAGGA GGCCCGTCGA
GCTCATGAAG CCCTCGCCGG TCGCACCACC GTGGGCAAGG TCATCCTCGT GCCCTGA
 
Protein sequence
MKAVLIQRHG GPEVLEIADV PEPHPAPGEV AIKLEAIGVN YIDLYHREGW YPLSLPTVLG 
SEGAGTVIEV GEGVTSVSIG DRVAFANHLG AYAEVVVVPA GRLVTIPDDV TADVAAAVLL
QGMTVHALVN SCARVEPGAT VLVHAAAGGV GSLLVQYLVR RVASTVVATA STAEKRTRAR
RLGAQIVTDY DGFVDAARRL GGVSVAFDGV GRATFDGSLA ALAPRGMLVL YGQASGPVPP
VDPQILNRQG SIFLTRPSLP HYVATPEELR WRAQAIFADV AAGLLEVTIA ERIPLEEARR
AHEALAGRTT VGKVILVP