| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0182 |
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| Symbol | |
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| ID | 8322235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 189674 |
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| End bp | 190645 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644951329 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003108824 |
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| Protein GI | 256371000 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.467947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCCGTG GAGGGGACAG TTCGGCGCTA CCGCCTGAGC TGTGGCAACG TGCGAGCCGT
TACACCTGGA TCGCCACGGC ACTGCTCCTG CCGACCATGG TGCCCGCCTT CGTCATCGGT
GGGTGGGCGC TGCGGGTGTC GGACGCCTCG TTCGCGCTGG CCGCGCTGGT GGGATGGCTC
GCGCGTCGCC GACTCGGTCT CGGGGCAAAC CTCCTTGTCA CGACCGTCGC GAGTGCAGGC
GCCCTGCTCC AGCTCTCGGT GCCGGTCGAT GCCGTGACGA CCTTGATCGC AGCGAGCGTC
ATCCGCTCCA CCTTGCTCCT CTTTGCCGGG GTGGGCGTGT ACGCGATGAG CTTCATCGGC
GGGCGGGTGG GGCTCGCGTT CGCCGGCGTG CTCCTGGTCG CCACGGCCCT CGTGCACCCG
GTGGGTTTGC TCGGCGCGGT GCTCGCCCTG GCGCTCGCCG CCCTGCTCGG CTACATGATC
CACGGGCTCG TGGAGCATCT TGCCCATCGC GAGCGTGAGC TGAGTGCTGC TGCGCTCGTC
GATCCGCTCA CCGGTCTCGG CAATCGACGG GCCCTCGAGC GTGCGTTCGA CGTCGCCGTG
GCCGAAGCCG CACGACAGGA CACCACGCTC TTCGTGTCGC TGTGGGACCT CGATGCGCTC
AAGCGCACCA ACGATGAACG TGGTCACGAG GCCGGCGATG CCCTCCTGCG GGACTTCGCT
GCGGCGCTCA CGCGGACGCT CCACGATCAA GACCAGGCCT TTCGTATCGG GGGCGACGAG
TTCTGCTGCT TGCATCTCGG CTTGAAGGAC GGCGCATCGA TCCTCGCGCG CATGGCACTC
GCGTTTCCGA GCGTCTCGGG CGGCTTTGCC GAGGTTGGCA ACGACTCGCT GGGGACGGCG
CTTGCTCAGG CCGATCGCGC CATGTACGCC GCGAAGCGCC GTCGTCGGCG CCACGACGGC
TCCGACGGCT GA
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| Protein sequence | MSRGGDSSAL PPELWQRASR YTWIATALLL PTMVPAFVIG GWALRVSDAS FALAALVGWL
ARRRLGLGAN LLVTTVASAG ALLQLSVPVD AVTTLIAASV IRSTLLLFAG VGVYAMSFIG
GRVGLAFAGV LLVATALVHP VGLLGAVLAL ALAALLGYMI HGLVEHLAHR ERELSAAALV
DPLTGLGNRR ALERAFDVAV AEAARQDTTL FVSLWDLDAL KRTNDERGHE AGDALLRDFA
AALTRTLHDQ DQAFRIGGDE FCCLHLGLKD GASILARMAL AFPSVSGGFA EVGNDSLGTA
LAQADRAMYA AKRRRRRHDG SDG
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