| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0177 |
|---|
| Symbol | |
|---|
| ID | 8322230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 186361 |
|---|
| End bp | 187344 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644951324 |
|---|
| Product | Fructose-bisphosphate aldolase |
|---|
| Protein accession | YP_003108819 |
|---|
| Protein GI | 256370995 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3588] Fructose-1,6-bisphosphate aldolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0152366 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACGACA TTCGCACGAT CGCTGCGGCC ATGGTGGCAC GACCGAAGGG CATTCTCGCT
GCCGACGAGA GCAGTCCGAC CCTGACCAAG CGCTTCGACG CGCTCTCGAT CCCATCGACG
CCGGAGAGTC GCCTCGCCTG GCGGGAGATG CTCTTCTCCA CGCCCGAGCT CTCCACGTGG
ATCTCGGGGG TCATCCTCTA CGACGAGACG TTCAACCAGC GAACCTCCGA TGGTTCGACG
ATCCCCGAGT TCCTCGCCGC CCGTGGCATG ATCCCAGGGA TCAAGGTTGA TACCGGTGCC
AAGCCGCTCG CTGGCTCGAG GGGAGAGCTC GTGACGGAGG GGCTCGATGG GCTTGGTTCG
CGGCTTGCGA CCTACCACGC CAAGGGGGCG CGCTTTGCCA AGTGGCGCGC GGTGATCTCC
ATCGGGGACG GTCGGCCGAG TTCGATGTGC GTCGCCGCCA ACGCTCACGC GCTCGCTCGC
TACGCGAAGC TGTGCCAGGA GAACGGCATC GTCCCCATCG TCGAGCCGGA GGTCCTGATG
GAAGGCGATC ACTCCATCGA GGTCAATGCG GCCGTGACCC GACGCGTGCT CTCCGAGGTG
TTCGCCGAAC TTCGACGCTT CGACGTCGAC TTCGAGGGCA TGGTGCTGAA GCCGTCGATG
GTCACGCCTG GGGTGCTTGG CGAACCCGTG AGCGTCGACA CGGTCGCACA GGCGTCGGTG
GCGGTCTATC GCGACAGCGT GCCGGCCTCC GTCGCCGGGA TCGCCCTCCT GTCGGGTGGG
CAGGCAGACG ACGTCGCGAC CGCGCACCTG CGCGCGATGA ACGCCGGAGC GACGTTGCCC
TGGCCGATCA CGTTCTCCTA CGGACGAGCG CTGCAGGACC TGCCCATGCG CATCTGGCGT
GGTGATGCGG CCAACGCGGC GGCGGCGCAG CAGTCGCTCG CGACGCTCGC GGCGGCGAAC
GCTGCCGCGG CCGAAGGCCG CTAG
|
|---|
| Protein sequence | MDDIRTIAAA MVARPKGILA ADESSPTLTK RFDALSIPST PESRLAWREM LFSTPELSTW
ISGVILYDET FNQRTSDGST IPEFLAARGM IPGIKVDTGA KPLAGSRGEL VTEGLDGLGS
RLATYHAKGA RFAKWRAVIS IGDGRPSSMC VAANAHALAR YAKLCQENGI VPIVEPEVLM
EGDHSIEVNA AVTRRVLSEV FAELRRFDVD FEGMVLKPSM VTPGVLGEPV SVDTVAQASV
AVYRDSVPAS VAGIALLSGG QADDVATAHL RAMNAGATLP WPITFSYGRA LQDLPMRIWR
GDAANAAAAQ QSLATLAAAN AAAAEGR
|
|---|
| |