| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0170 |
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| Symbol | |
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| ID | 8322223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 177964 |
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| End bp | 179799 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644951317 |
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| Product | Xylan 1,4-beta-xylosidase |
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| Protein accession | YP_003108812 |
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| Protein GI | 256370988 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3664] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.268815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGCCC ACGGAGAGCA GCAGGACGCG ACCCGGGCGG TACTCGAGCG CTGGGAGGAG
GGAACTCGTG AGCGACGTGT CGACGAGCAC GTTGGTCACC TTCCTCCCCC GACGGGCGTC
GAGGCCTGGC GTGGCTCGGG CTGCGTCACC ATCACATGGC AGCGTGTCGA GGGTGCGGTG
TGCTATCTCG TCGAGCGGGC GCCGAGTCCG GACGGTCCGT GGACGGTGCT TCGGCGCGCC
GAGCACGACC TCGTCGAAGT CGCTGGGCCT CCAACGCTGG ACACGAGCCG GGAGGCGGGC
GGTTGGTACC GGGTGGCGGC ACTCGAAGAT GTGGGTCGTC GTCCGACGTC GTTCTCCGAT
CCGGTCGAGG CGCGCGATGG CGACCGCAGC GCAGCGGTGA CGGTACGGGT CGAGGCGTCG
TCCCCGGTCG GCTCACTCGC GCCCGTGTGG TGGATGGTGG GCTCCGAGCG GCCAGGGCAG
CTGCTCCTTC GCGACGACGG CTTCGGTCAT GACGTTCGGG CCGAGGTGCT CGAGGCCTAT
CGCCGGGCCG CGGCGATCGG CGTGACGCAC GTTCGGGCGC ACTGCTGGCT CGATGACGCC
TTTGGGATGG TGGACGCGTC TGGTCGCCTG ACCGAGACGA GCGCGCTCGA CGAGGTGCTC
GATCTCGTGC TCGCCAGTGG TCTTCGCCCG ATCGTGGAGC TGTCCTTTAC GCCATCATCC
CTGGCCACGG ATCCAGCGGC AACCGTGTTC ACCTATCGGG CCAACGTGTC GCCTCCCGCT
GACCTCGTTC GCTACGGCGA ACTCGTGGCG CAGGTGGTGC GCCACATGAT CGAGCGCTAC
GGCGCCGACG AAGTCCGCGA GTGGGCGTTC GAGGTGTGGA ACGAGCCCAA CTTGGCCGTC
TTCTGGACCG GCGACATGGC TGCCTACTTC GCACTGTACG ACCGGGTCGC GAGGGCGGTG
AAGGAGGTGG ATCCGGCGCT ACGTGTGGGA GGCCCCGCAA CCGCGGGAAG CGGGTGGATC
GCGCCGTTCC TCGACTTCGT CCACGAGACC GATGCGCCGT TGGACTTCCT GTCGACGCAC
ACCTATGGCG GTATGCCTCT CGACCTGCGT GCCCAGCTTG CGCGCGTCGG TCGGGGGGAC
GTCCCCGTGT GGTGGACCGA GTGGGGCGTG TCGCCGACGC ACCACGCGCG GGTCAACGAC
GGGGCCTTTG GTGCGCCCTT CGTGGTGCGC GGCATGAAGG CAGCACAGCA GATCGCAGCT
GCCCTCTCGT ATTGGGTGGT GAGCGACCAC TTCGAGGAGC TCGGCAGGCC GGAACGCCTC
GCCGCGGGAG GTTTCGGGCT GTTGACGGTC GGCAACCTTC CGAAGTCGCG CTGGCACGCG
CTCAGTCTCG TCGCTGAGCT GCCTTCTCGA ATCGTGGCGA CCGAGGTGGA GGGCGACGGT
GCTGGAGCAC TCGTGGACGG GTGGGCGGGT GCCGATGCGG AGCGGGTCGA CGTTCTCGTG
TGGAACGGCT CGCACGATGC GGCCGACGCC GAGGGTCGCG GTGACCTCGA TCGGACGGTG
ACTGTGACGC TCGAAGGGCT CGAGGACGGC GAGTGGCTGC TCGAGCTCAC GCGCGTCGAT
CGGGATCACG CTTCGTTCCT CGAGGCGATC GCGGGTGAGG ACCCATGGCC TGGGCCCGAG
GCCACGGCGG CCCTCCGGGA GCGCGCGGCG CTGCGGGTCG AGCCGGCTGG CCGAACCTCC
GTCGTCGACG GGGGGCGCAT CGAGATGACC GTGCGCGTGC CGATGCCCGG GTTGGTGCGG
CTCAGGGCAC GCCGCGCGAG GAGTTGGGAG GCCTGA
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| Protein sequence | MKAHGEQQDA TRAVLERWEE GTRERRVDEH VGHLPPPTGV EAWRGSGCVT ITWQRVEGAV
CYLVERAPSP DGPWTVLRRA EHDLVEVAGP PTLDTSREAG GWYRVAALED VGRRPTSFSD
PVEARDGDRS AAVTVRVEAS SPVGSLAPVW WMVGSERPGQ LLLRDDGFGH DVRAEVLEAY
RRAAAIGVTH VRAHCWLDDA FGMVDASGRL TETSALDEVL DLVLASGLRP IVELSFTPSS
LATDPAATVF TYRANVSPPA DLVRYGELVA QVVRHMIERY GADEVREWAF EVWNEPNLAV
FWTGDMAAYF ALYDRVARAV KEVDPALRVG GPATAGSGWI APFLDFVHET DAPLDFLSTH
TYGGMPLDLR AQLARVGRGD VPVWWTEWGV SPTHHARVND GAFGAPFVVR GMKAAQQIAA
ALSYWVVSDH FEELGRPERL AAGGFGLLTV GNLPKSRWHA LSLVAELPSR IVATEVEGDG
AGALVDGWAG ADAERVDVLV WNGSHDAADA EGRGDLDRTV TVTLEGLEDG EWLLELTRVD
RDHASFLEAI AGEDPWPGPE ATAALRERAA LRVEPAGRTS VVDGGRIEMT VRVPMPGLVR
LRARRARSWE A
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