| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0150 |
|---|
| Symbol | |
|---|
| ID | 8322203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 158966 |
|---|
| End bp | 159874 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644951297 |
|---|
| Product | surface presentation of antigens (SPOA) protein |
|---|
| Protein accession | YP_003108792 |
|---|
| Protein GI | 256370968 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1868] Flagellar motor switch protein |
|---|
| TIGRFAM ID | [TIGR01397] flagellar motor switch protein FliM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGGGG AGAACGAGGC GCGTGAGCGC CAGGTGCGTA CTGTCGACTT TCGCCTCCCC
CACAGCTTCG ACCGTGCCGA GCAACGAGGA CTCGAGCTCC TCGTCGAGAA CGCGCTCCGA
CCGGCTGCAA CCTTGATGGG TGCGAGCCTG CGCCGCGGCG TGCGGCTCGA GCTCGGTCGG
ATGGACCAAC TTCCCTGGGA GCAGGTCGTC GCCCAACAGG ACGGCCCAGC CCTGGTCATC
TCGTTCGCGC TGGTTCCATT GGGATCGCGT GGCGTTCTGC GCTTCGGAGC CGATGCGGCC
CTTCGCCTGC TCGATCTGCG GCTCGGCGGT GACGGGTCGC CGATCGAGCC CCGTGCGCTC
ACCGAACTCG AGCAGGGACT GCTCGTCCAG GTCTTCTCCG ATCTGCTCGT CCAACTCGCC
TCGAGTCTGC AGACGCTGCT CGACGTCCGC TTGGATCGGG TGGGGGCAGA GACGTCCCTC
GAGTTCGTCC AAGTCATCAG CCCGGGCGAG ATGTGCCTGG TCGTGCCGAT CGCGCTGGGC
ATCGGTGACG AACTCGAGAG CGAGCTCACG CTCTATCTGC CCTATTCCAT GCTGCGGCCC
GTCGTGGAGC TCATCGCCCA GCGCGCCATC GTGGCCGTCG ATCGTGGCGG CGATACGTTC
CGGGATCTGC TCGCCGCTCG TCTGCACGAC GTCCGCCTCG AGGTCAGCGT CCGGTTCGAG
CCGACGTCGA TCAGTTCGCG CACGCTGCTC GAGCTTGCTC CCGGTGACGT CGTCCCCCTC
GGCCATCGCC AAGGACAACC GGCCTGGGTC ATCGTCGATC GCACGCGGCT TCATCGGGCC
GTCATGGGTC AGTCGGGCTC GCGCGTCGCC GCCGTCATCA TCGAGGAGGA GGAAGAGGCT
CATGCCTGA
|
|---|
| Protein sequence | MSGENEARER QVRTVDFRLP HSFDRAEQRG LELLVENALR PAATLMGASL RRGVRLELGR
MDQLPWEQVV AQQDGPALVI SFALVPLGSR GVLRFGADAA LRLLDLRLGG DGSPIEPRAL
TELEQGLLVQ VFSDLLVQLA SSLQTLLDVR LDRVGAETSL EFVQVISPGE MCLVVPIALG
IGDELESELT LYLPYSMLRP VVELIAQRAI VAVDRGGDTF RDLLAARLHD VRLEVSVRFE
PTSISSRTLL ELAPGDVVPL GHRQGQPAWV IVDRTRLHRA VMGQSGSRVA AVIIEEEEEA
HA
|
|---|
| |