| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0133 |
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| Symbol | |
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| ID | 8322186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 141738 |
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| End bp | 145886 |
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| Gene Length | 4149 bp |
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| Protein Length | 1382 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644951280 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_003108775 |
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| Protein GI | 256370951 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3002] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGAACC TGGTGAGTTC GTGGTTGCTC GCGGTCGCGG TGGTCGCCTA CCTGGTGGTG
GGTCTCGGTC TCCTGGTCGC GCGGGGCGCG GCCGGACGCA GTGCGCGACG GTGGACGACG
GTGGCGTCGT GGGTCGGGCT CGTCGCCACG CTCGGCGCCT CGACGGCGTT CGTCGTCGGC
CACGAACGAT CGACCACGCT GGTCGCGGTG CCGTTGCCCG CACACCTCGG GCACGTCGCC
GTCGATTCGC TCGTGAACGC CCTCACCATG ATCGTCGTCA CCTTGGTGGC GTTCGTGGGC
ACCGTGGTCG TACGCTACTC GACGTCCTAT CTCCGTGACG ACCCCGCTGA GCTGCGGTTC
TATCGCTGGT TGAACGTGAC GCTCGGCTTG TTCCTGTGGC TGATCGTCAC CAACGACGTG
TGGACGTTCT GGCTGCTGTT CGTCGGTGCG AGTCTGTCGC TCCACGAGCT GCTCGTGCTC
TATCGCGATC GACCGCTGGC CGTCACGGCG GCGCGCAAGA ACTTCGCGCT CGCCAGACTC
GCGGACGTGA GTCTGGCGGT TGCGCTGGTG CTCGTCGTGG AGGCGACGGG GCGCTCGAGC
TTCGCCGGCA TCGCGGCGTG GTTCCACGGG GCGCACCCCC CGATCGGCGT CGATCTCGAG
GTCGCCGCCG GGCTGATCGC TCTGACCGCG GTCGTCAAGA GCGGTGTCTT CCCGTTCCAC
GGGTGGCTGA TCCAGGTCAT GGAGGCGCCG ACCCAGGTCT CGGCGCTCCT GCACGCGGGG
CTCATCTACA CGGGTGCCTT CCTCCTCCTG CGCATGAGCT GGCTGGTCGC GTCGGTGCCG
TGGGTGTGGG TGGTGCTCAG CCTCGCCGTG ATCGGGGTGT TCGTGTCGTC GCTGATGATG
CTCACCGAGA CGAACATCAA GGAGGCGCTC GCGTACTCGA CCTCCGCCCA ACTTGCGTTC
ATGATGATGG AGTGTGGGCT CGGGCTCTAC AGCGTCGCGG TGCTCCACAT CGTCGCACAC
TCGGTCTACA AGGCGCATGC ATTCCTCTCG TCGGGAAGCG TGGTGGATGG CCATCGGGGC
GCGATCCTCA CCAAGGTCCC GGCGCGTCGA ACGTTCGGGC AGGTCGAGGG CGCGCTCGCT
ATCTCCGCGC TCGTCACCGT GGGGATCGCC GAGCTCCTCC GGGTCGACGT GGTGCACGAG
CCCACGTTGG CCGCCATCGG CTTCGTGGTC GCGGTCGCCA TGACGCAGCT GCTGCTGCAG
GGGGTCGGGG GGTCAGACCG TCAGGGACGT CGCTTGCTCG TGCGCGCGAG CGGCTTCAGT
GTGCTCGTGG GTGCTGCCTA CTTCGGTCTG CACGACGTCA TGGTGCGCCT GCTCGGCTCC
ACGGTGCCGT CCGAGAGCGG CCAGGCGGAC CACATCCCGG GGTGGGTGCT CGTCGTGGTC
GTGGCGGCGT TCGTCGCCTT GCTCCACATC GGCCAGTTCC TCGGTCCACT CAGCCGGACC
CGCTTCGGCC AGTGGCTCTA CGTGGCGCTG TGGAACGGTC TGTGGGTGGA TGCCGCCATG
CGTCGCCTCG CGTGGTTCGA CCACCTGCGC CTCGGTCATC GTCCGCTGCA CGCCCCTACC
GAGCCTGAGC CTGTTGCGGC GACGGGCGAT GAGCCCGTGC CCGGATCGGC GGCCTCGGTG
CTGGAGGCCG CGCGCGTGGC GTGCGACCGG ATCGCGCCGG TGTGGCCGCT CCGGCACTTC
GTCGCCGTGA ACCCCTACTT CGGCATGCGC GACCTGTCGT TCTGGGAGGC CGACCGCTAC
CTCCAGACCA TCGCAGGTTC TCGCCTGGTC ATGCCGCTCG CCTACTACCG AGAGCAGCTG
CAACAAGGAC GCATCGGTCC ACGCGATATC CGTGACGCAG CGCGTCGCCT TGGGCGCGAG
GGGGCGGTCG AGGGCCTGCT CGCTCGCCTG GAGGAGGCTC GTAGTGAGCC GCTGCTCCCT
CGGCTCCCGC TCTTCAGCGA TCACCTCGGG CGCCTTCGCG GTCGGGACAT CACCACGGCC
ATCGTCGAGC GGCTCAGCCA TTTCCTGGCG GCCTACTTCG ACGAGGGGCA AGCCACCTGG
CACCTTCCGT GGCAGGGGAA CTCGTTGTGG CAGGCGTGGC GGTCATCGGT CCAGGTCGAC
GCGACGCCGC GCATCCTCGG ACTCCCGTGG CCCAAGTCGG CGCTCGCGGC CCTGCCCGAG
ACGCCCGAGG ACGCCATCGC CGCTGCGCTG GGCGTGCTCG GCGTTGCTCA CGAAGCGATC
GAGGACTACT TGGTCGCTGC GTTGTTCTCC ATCGGCGGGT GGGCGTCGTG GGCACGGTAC
CGACGGTGGC AGGCGGAGCT CGTCGGCTCG ACCGACGAAA CCCTGTTCGA ACTGCTGGCG
ATCCACGTCT CGGCCGAGGC GATCCTCGCC CAGGGACTTG ATGATCCTCG GGTGCTCGCC
TCGTGGCGCG ACGCCGTCGT GGCAGCCCAT CGGTCCTGGG TCGCCTCGCG GCACGATCCG
CTCGACGACG CCGCGATCAT CCACACCGCG TTCGAGCTGC ACTATCGGCG CCGGCTCGCG
CGGACGCTGG CTGCCGGTGC TCGCGCCGGG GAGGCGCCCA CCGGGGAGCG TCCTCGCGCC
CAGCTCGCCT TCTGCATCGA CGTGCGCTCG GAGGGCATCC GTCGCGCCGT CGAGGCCCGC
GTCGCTGGCG CCCAGACGCT CGGCTTCGCC GGCTTCTTCG GCGTTCAGAT GGAGTACGTC
CCCTTCGGTA CCGAGCACGC ACGCGCACAC CTGCCGGTCA TCTTTGCGCC GCCCTATCGG
ATCCGCGAGG ACCTCGTCGA TGCCTCCGAC GACGACCGTG CGCGTGCGGC GGAGCGACGT
CGCCTTCGGC TCGGCGCCGG CGCGGTCTGG AAGACCTTCA AGTCCTCGGC GGCCTCCACC
TTCACCTTCG TCGAGTCGAC CGGGTTGGTC TATATCCCGA AGCTCTTCGG CGACGCCATG
GGCTGGTCCC GCACGGTCGC GCACCCCGAC GCCCGAGGTC TCGCTGGCGA CCTGCGCGCC
CGGCTGCGCC CGAGGCTGAC GCCGATCGGT CATCCCGGGG GCAACGACGG GATCCCCGAG
GATCGTCTCG CCGAGATCGG TCGCTTCATC CTCACCTCGA TGGGCCTCAC CGGCGGGTTC
GCGCCGCTCG TGGTCCTGGT GGGGCATGGG AGCGAGACCG TCAACAACCC GCAAGGATCC
GGGCTCGACT GCGGTGCCTG CGGGGGGCAG ACGGGCGAGG TGAGCGCGAA GGTGGCGGCG
GCGTTGCTCA ACGATCCGCG AACCCGAGCA GGCCTCGAAC GCGTGGGGAT CTCGGTGCCG
AGCGACACGG TGTTCGTCGC GGCGCTCCAC TCCACGTTGA CGGAGCAGGT GAGGCTCTTC
GACGTCGACG CGCTCGATCC CGCCCATCGC ACGCTCGCCC GCGACCTCGA GACCGATCTC
GCCAGCGCGA CCCGGCTCGC CGCGACGTGG CATGCGACCT CCCTCGGTGT GACCGCCGAC
CAGGATCTGG CGCACGACCT GGCGCGTCGT GGCCGCGACT GGGCGGAGGT TCGGCCGGAG
TGGGGCCTCG TCGCCAACGC CGCCTTCATC GCGGCTCCAC GCGCAAGGAC CGCCCACGTC
TCGCTCGAGG GCCGCGCGTT CCTCCACGAC TACGACTGGC GCCACGACAC GGACTTTGCG
ACCCTCACGC TCATCATGAC CGCTCCGATG GTGGTCGCGA ACTGGATCAA CCTGCAGTAC
TACGCCTCGA TGGTCGACAA CCGGCGCTTC GGGAGCGGAA CGAAGGTCCT CCACAACGTC
GTCGGTGGTT CGATCGGAGT CCTCGAGGGC AACAACGGCG ATCTGCGGGT CGGCCTCGCG
CTGCAGTCAT TGCACGACGG GACACGCTGG CTCCACGAGC CCGTGCGCCT CACCGTGGTG
GTGGAGGCGC CTCGGGGCGC GATCGACCAG GTCGTCCGGG AACACCAGCT CGTTGCCGAC
CTCGTCGAGC ACGGCTGGCT GGTCGTGACC CAACTCGAAC CCGACGGCAC TCTCTACGAA
CGCGAGGGCG ATGGCCGTTG GCGCGCGGTC ATCGACGACG ATTCGTTGGC AGCGACCAGC
GTTCGCTGA
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| Protein sequence | MGNLVSSWLL AVAVVAYLVV GLGLLVARGA AGRSARRWTT VASWVGLVAT LGASTAFVVG
HERSTTLVAV PLPAHLGHVA VDSLVNALTM IVVTLVAFVG TVVVRYSTSY LRDDPAELRF
YRWLNVTLGL FLWLIVTNDV WTFWLLFVGA SLSLHELLVL YRDRPLAVTA ARKNFALARL
ADVSLAVALV LVVEATGRSS FAGIAAWFHG AHPPIGVDLE VAAGLIALTA VVKSGVFPFH
GWLIQVMEAP TQVSALLHAG LIYTGAFLLL RMSWLVASVP WVWVVLSLAV IGVFVSSLMM
LTETNIKEAL AYSTSAQLAF MMMECGLGLY SVAVLHIVAH SVYKAHAFLS SGSVVDGHRG
AILTKVPARR TFGQVEGALA ISALVTVGIA ELLRVDVVHE PTLAAIGFVV AVAMTQLLLQ
GVGGSDRQGR RLLVRASGFS VLVGAAYFGL HDVMVRLLGS TVPSESGQAD HIPGWVLVVV
VAAFVALLHI GQFLGPLSRT RFGQWLYVAL WNGLWVDAAM RRLAWFDHLR LGHRPLHAPT
EPEPVAATGD EPVPGSAASV LEAARVACDR IAPVWPLRHF VAVNPYFGMR DLSFWEADRY
LQTIAGSRLV MPLAYYREQL QQGRIGPRDI RDAARRLGRE GAVEGLLARL EEARSEPLLP
RLPLFSDHLG RLRGRDITTA IVERLSHFLA AYFDEGQATW HLPWQGNSLW QAWRSSVQVD
ATPRILGLPW PKSALAALPE TPEDAIAAAL GVLGVAHEAI EDYLVAALFS IGGWASWARY
RRWQAELVGS TDETLFELLA IHVSAEAILA QGLDDPRVLA SWRDAVVAAH RSWVASRHDP
LDDAAIIHTA FELHYRRRLA RTLAAGARAG EAPTGERPRA QLAFCIDVRS EGIRRAVEAR
VAGAQTLGFA GFFGVQMEYV PFGTEHARAH LPVIFAPPYR IREDLVDASD DDRARAAERR
RLRLGAGAVW KTFKSSAAST FTFVESTGLV YIPKLFGDAM GWSRTVAHPD ARGLAGDLRA
RLRPRLTPIG HPGGNDGIPE DRLAEIGRFI LTSMGLTGGF APLVVLVGHG SETVNNPQGS
GLDCGACGGQ TGEVSAKVAA ALLNDPRTRA GLERVGISVP SDTVFVAALH STLTEQVRLF
DVDALDPAHR TLARDLETDL ASATRLAATW HATSLGVTAD QDLAHDLARR GRDWAEVRPE
WGLVANAAFI AAPRARTAHV SLEGRAFLHD YDWRHDTDFA TLTLIMTAPM VVANWINLQY
YASMVDNRRF GSGTKVLHNV VGGSIGVLEG NNGDLRVGLA LQSLHDGTRW LHEPVRLTVV
VEAPRGAIDQ VVREHQLVAD LVEHGWLVVT QLEPDGTLYE REGDGRWRAV IDDDSLAATS
VR
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