Gene Afer_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0115 
Symbol 
ID8322168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp126819 
End bp127196 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content67% 
IMG OID644951263 
Productflagellar protein FliS 
Protein accessionYP_003108758 
Protein GI256370934 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1516] Flagellin-specific chaperone FliS 
TIGRFAM ID[TIGR00208] flagellar biosynthetic protein FliS 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.906017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTTCAC TGGCTCAACG CGCCTACGTC GAGAACGCGG TGGAAACCGC GACGCCGGCC 
CAGCGCCTGC TCATCCTGTT GGACCGCCTG GAAGCGAATC TGGTGGCCCT CGGTGACGCC 
TTTCGGGTGC GTGACCTCGA GGCGATCCAC GTCAACGCCA AGGCTGCCCA GGCAGCGTTG 
GCGTTGTTGC GAGGGGCGCT TCGCGAGGAC GTGTGGGAGC ACGCCGCGAC GATCGCGACC 
TTGTACACGT GGGCGCTGGA GCGACTCGTC CGAGCCAATG TGGACAAAGA TCCGGCTCCC 
TACGAGGAGG CCCGCTCGGT GCTCGAGCCG CTCATCGCGG CGTGGCGACA CGCTGCGATG 
GAGGTCTCGC ATGAGTGA
 
Protein sequence
MPSLAQRAYV ENAVETATPA QRLLILLDRL EANLVALGDA FRVRDLEAIH VNAKAAQAAL 
ALLRGALRED VWEHAATIAT LYTWALERLV RANVDKDPAP YEEARSVLEP LIAAWRHAAM 
EVSHE