Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0068 |
Symbol | |
ID | 8322116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 60822 |
End bp | 61691 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644951213 |
Product | Integrase catalytic region |
Protein accession | YP_003108712 |
Protein GI | 256370888 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGGCGG AGTACGCTCG CTTCGAGATC AAACGGATGG CACGCTTACT CGAGGTCTCC CGGGCTGGCT ACTACCGATG GCGACGCACC CAGGTAGCAC CGTCGCGTCG GGCATGTGCA AGACGCGACC TCGAGAACCG AGTGGTCGCG GTCCACCAGG CATCCTCTGG CACCTACGGC GCACGACGGA TCACGGCGGC ACTCCTCGCC GCTGGCGTGG TGACGAGCCA CAACACGGTG GCAGCAGCGA TGGCCAGGCG CGGCATCGCC GGTATCAGCC CCAGGAGGTT CCGCCCAGCG ACCACCCACG CCGATCCGAA GGCGATCTAC CCACCAGACC TCGTTGCCAG GAAGTTCGAC CCGGGGCGCC TGCACGCCCT CTGGACCTCG GACATCACCT ACCTCGCTCT CGCCGGCGCG ATGGCATACC TGTGTGTGGT GCGCGACGAG CACTCGCGGC GGGTGCTCGG ATGGAGCGTC GCGGAGCGCA TGGAGACCAC GCTCGTGCTC GAGGCCCTCG GCCAGGCCGT CGCGGTGCGT GGGTCCCACG CGCAGGGGGT CATCTGGCAC ACCGACCGAG GGAGTCAGTT CAGCGACCAT CGAGTTGTGG CCTTCTGTGC CCGACACGGG ATCACGCGCT CCATGGGGCG AACCGGCACC TGCTACGACC ACGCGAGCGC GGAGTCCTTC TGGTCGATCT TCAAACACGA GTTCTTCTAC CGCCACGCCT TTGGCGACCT CGCCGAGCTG CGCCGCGGCA TACAGAGCTA CATCCAGTTC TACAACCACC AGCGCAGCTG CTCGAAGATC GGCTACCTTG CCCCAGTCGT CTTCGAGCAC CTCGTCGCGG AGGAGGCTCG CGTGAAGTAA
|
Protein sequence | MEAEYARFEI KRMARLLEVS RAGYYRWRRT QVAPSRRACA RRDLENRVVA VHQASSGTYG ARRITAALLA AGVVTSHNTV AAAMARRGIA GISPRRFRPA TTHADPKAIY PPDLVARKFD PGRLHALWTS DITYLALAGA MAYLCVVRDE HSRRVLGWSV AERMETTLVL EALGQAVAVR GSHAQGVIWH TDRGSQFSDH RVVAFCARHG ITRSMGRTGT CYDHASAESF WSIFKHEFFY RHAFGDLAEL RRGIQSYIQF YNHQRSCSKI GYLAPVVFEH LVAEEARVK
|
| |