Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0061 |
Symbol | |
ID | 8322109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 55830 |
End bp | 56504 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644951206 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003108705 |
Protein GI | 256370881 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATGCG GAGAGCATGG AATCGAGAGG GTCGACCCCT CTGCAACCAC GGCTCGGCCT CGACCGGGAC GGCCTCGGGA TCGGCGTGTC GACGCCTCCG TCATGGGCGC AACCCTGGCC CTTCTCGACG AGGTGGGCTA CAGCGCACTC AGTCTCGAGA TGGTCGCTCG TCGTGCTCGT GTTGGCAAGC CGAGCATCTA CCGTCGCTGG CCGGGCAAGG CTTCGCTCGT CGTGGACACG ATCGTCACGA TCGCGGGCAC CGATCCGGCA CCGGACACCG GTTCGCTCCG CGACGACCTC AGGGCGGTCG CCCTGGCTAT GGCTGCGCTG TATCGGACGC CGCTCGCTCG CACGGTCGTG CTACCCCTTC TCGGGGATCT CGCCGACGAT CCTGATCTTG GCGAGCGCTT CAGGCGGCGC TACGTCGCGC CGAGGCGGGG CTCGGTCCAC CGGGCGCTCG AGCGTGCGCA GGAGCGCGGC GAGATCCCGC GGGTGGACGA CCCCGAGCTC ATCTGCGATC TGATCGCAGG GCCGTTGTTC CACCGTGCAT TTCTTGTTGC CGGAGAGATC GACGACCGCT TCGCCCTGGC AACGGTCGAC GCGGTGCTGA TCGTGCTGGA GTCGGGGCAA GCCGGCGACC GCAACTCGGG AACAGGAAAA GGAGCCTCCC AGTGA
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Protein sequence | MICGEHGIER VDPSATTARP RPGRPRDRRV DASVMGATLA LLDEVGYSAL SLEMVARRAR VGKPSIYRRW PGKASLVVDT IVTIAGTDPA PDTGSLRDDL RAVALAMAAL YRTPLARTVV LPLLGDLADD PDLGERFRRR YVAPRRGSVH RALERAQERG EIPRVDDPEL ICDLIAGPLF HRAFLVAGEI DDRFALATVD AVLIVLESGQ AGDRNSGTGK GASQ
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