Gene Afer_0061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0061 
Symbol 
ID8322109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp55830 
End bp56504 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID644951206 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003108705 
Protein GI256370881 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATGCG GAGAGCATGG AATCGAGAGG GTCGACCCCT CTGCAACCAC GGCTCGGCCT 
CGACCGGGAC GGCCTCGGGA TCGGCGTGTC GACGCCTCCG TCATGGGCGC AACCCTGGCC
CTTCTCGACG AGGTGGGCTA CAGCGCACTC AGTCTCGAGA TGGTCGCTCG TCGTGCTCGT
GTTGGCAAGC CGAGCATCTA CCGTCGCTGG CCGGGCAAGG CTTCGCTCGT CGTGGACACG
ATCGTCACGA TCGCGGGCAC CGATCCGGCA CCGGACACCG GTTCGCTCCG CGACGACCTC
AGGGCGGTCG CCCTGGCTAT GGCTGCGCTG TATCGGACGC CGCTCGCTCG CACGGTCGTG
CTACCCCTTC TCGGGGATCT CGCCGACGAT CCTGATCTTG GCGAGCGCTT CAGGCGGCGC
TACGTCGCGC CGAGGCGGGG CTCGGTCCAC CGGGCGCTCG AGCGTGCGCA GGAGCGCGGC
GAGATCCCGC GGGTGGACGA CCCCGAGCTC ATCTGCGATC TGATCGCAGG GCCGTTGTTC
CACCGTGCAT TTCTTGTTGC CGGAGAGATC GACGACCGCT TCGCCCTGGC AACGGTCGAC
GCGGTGCTGA TCGTGCTGGA GTCGGGGCAA GCCGGCGACC GCAACTCGGG AACAGGAAAA
GGAGCCTCCC AGTGA
 
Protein sequence
MICGEHGIER VDPSATTARP RPGRPRDRRV DASVMGATLA LLDEVGYSAL SLEMVARRAR 
VGKPSIYRRW PGKASLVVDT IVTIAGTDPA PDTGSLRDDL RAVALAMAAL YRTPLARTVV
LPLLGDLADD PDLGERFRRR YVAPRRGSVH RALERAQERG EIPRVDDPEL ICDLIAGPLF
HRAFLVAGEI DDRFALATVD AVLIVLESGQ AGDRNSGTGK GASQ