Gene Afer_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0038 
Symbol 
ID8322085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp39269 
End bp39862 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content71% 
IMG OID644951186 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003108686 
Protein GI256370862 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.698447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTCGT CCGAGCGCGC GAAAGAGCTG ACGGCGGTCG AACTCGCGAC GCTCGTCGTG 
CTCGAGGCGG CGCCGGCCCA TGGGTACGAG GTCGCCCGTC GGCTCCAGGC GACCTTCGGG 
GAGATCGGTC GCTTCTCGTA CGGTTCGATC TATCCGGCGC TCGCTCGCTT GGCGCGCAGT 
GGGCTCATCG CCTCCGTCGG TGCGGTGGGT CGCCTCGATC CAGCTCGCCT CCCCGGCGTC 
CTCGCGGCCG AGTTGGTCCT GGCTGCCAGC ACCGCAGGTG GCCGGAGCCG ACGGACCTAT 
CGCATCACCG ACGAGGGACG TGCGCGCCTG CGCACCGCGC TCGAGTTCGC CGACATGGCC 
GACGATCGCA TCGCGACCAT CGCGCTGGTG GCGAGTTCGC TGGTCGCGCC AGAGACGCGC 
CGCGCACTGC TGCGCGGTCG TCGGCGCAGC CTCGTCGAGC GTCTCGAGGA GCTCGACCGG 
CTCGAGCAGG AGATGCCCGA CCTCTGGCTC GACATCGTCC GGGCACGCAC GGCCTCGGAA 
CTCGCGGTCC TCGACGCCGC GCCGGCTGGC TACGGCGCAT CGACGACCTC GTGA
 
Protein sequence
MVSSERAKEL TAVELATLVV LEAAPAHGYE VARRLQATFG EIGRFSYGSI YPALARLARS 
GLIASVGAVG RLDPARLPGV LAAELVLAAS TAGGRSRRTY RITDEGRARL RTALEFADMA 
DDRIATIALV ASSLVAPETR RALLRGRRRS LVERLEELDR LEQEMPDLWL DIVRARTASE 
LAVLDAAPAG YGASTTS