Gene Amir_7080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_7080 
Symbol 
ID8331301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp8227525 
End bp8228049 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content71% 
IMG OID644947507 
ProductNUDIX hydrolase 
Protein accessionYP_003104716 
Protein GI256381056 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCAGT CGTCCGGCGG CACCGGCGGA CCGGCCCCGA GGCGCAGGCC CCGGCGGCGC 
GGTCGGCGGT TGAAGTCGGT GGACGAGACG TCCGCGGGAG GGCTCGTGGT GGACGTCACC
CGAGGCCGCG CGGCCGTCAT CGGGCGGCTG GATCGGCGCG GCAGGCTCCT GTGGTCGCTG
CCGAAGGGGC ACATAGAGCC TGGTGAGACC CCGGAGCGGA CCGCGGTGCG AGAGGTCCGG
GAGGAAACCG GTATTCATAG CAGGGTAATG CGGCGGCTCG GCTCGATCGA CTACTGGTTC
GCAGCCGAGG ACCGCAGGGT CCACAAGACC GTCCACCACT TCCTCCTCGA AGCGCTGGGC
GGCGACCTTT CCGACGAAGA CGTGGAGGTC ACCGAGGTGG CGTGGGTGCC CCTTGGCGAA
CTGGACGAAC GGCTCGCCTA CGCGGACGAG CGGCGCCTGG TGCGCCGCGC CGCCGAACTG
CTCGCCGAGT TCGGCGTTGA CCTGGATGGA GCGGAGTCGG CGTGA
 
Protein sequence
MSQSSGGTGG PAPRRRPRRR GRRLKSVDET SAGGLVVDVT RGRAAVIGRL DRRGRLLWSL 
PKGHIEPGET PERTAVREVR EETGIHSRVM RRLGSIDYWF AAEDRRVHKT VHHFLLEALG
GDLSDEDVEV TEVAWVPLGE LDERLAYADE RRLVRRAAEL LAEFGVDLDG AESA