Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_7073 |
Symbol | |
ID | 8331294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 8219133 |
End bp | 8219879 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644947501 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003104710 |
Protein GI | 256381050 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.672487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAG CCACTCGCCG AGAACGGCTA CGCGCGGAGA CCGAACGCGA CATCCTCACC CAGGCTCGCG CGCTTCTGAC CGAGAAGGGC CGCGATTCGG TAACTCTCCG TGCCATCGCA CGTGAACTGG GGATCACCGC GCCCGCGCTG TACCGCTACT ACGACTCGCG CGAGGCGCTG CTCGCCCGGC TGTGCGAGGT CGTCTGCGAG GACCTGGAGA ACACGCTCGG CGCCCTGCTC GCGGAGGTGC CGGACACCGC GCCGGTCGAC CAGCAGGTGT ACCTGGTGTG CCGGGGCTTC CGCAGGTGGG CGCTCGACCA CCCGCAGGAG TTCTCGCTGG TGTTCGCCTC GACGGACGGC GACTACGTGG CGGGCCGGGA GGTCGCGGCC CCCGAGGAGC ACGTGCGGGA CCGATTCGGC CGGGTGTTCC TGGAGATCGC GGCCAGGCTG GTGGCCAGCC ACCCGTTCCC CGACGAGGTG CCCGCGGGCG TGTCCGACCT GCTGCACGAG GACCTCGCGG TGTACCAGCA GGTGCTGATC AACCAGATCG AGGCGCGCGG CGTGCGCGTG GACGAGCGGA CCCTCGACCA GGCGGCGATC TTCCACATCC TCCAGGCGTG GGTGCGGATC TACGGGCACG TGGCGCTGGA GGTGTTCGGC CGGTTCCCGT TCGCGGTGAC CAACCCGGAG GAGATGTACG ACCAGATGCT CGCCCAGCTC CTCGGCGAGC TGGGGCTCCG GGGCTGA
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Protein sequence | MSEATRRERL RAETERDILT QARALLTEKG RDSVTLRAIA RELGITAPAL YRYYDSREAL LARLCEVVCE DLENTLGALL AEVPDTAPVD QQVYLVCRGF RRWALDHPQE FSLVFASTDG DYVAGREVAA PEEHVRDRFG RVFLEIAARL VASHPFPDEV PAGVSDLLHE DLAVYQQVLI NQIEARGVRV DERTLDQAAI FHILQAWVRI YGHVALEVFG RFPFAVTNPE EMYDQMLAQL LGELGLRG
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