| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_7052 |
|---|
| Symbol | |
|---|
| ID | 8331273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 8197240 |
|---|
| End bp | 8198448 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644947481 |
|---|
| Product | protein of unknown function UPF0118 |
|---|
| Protein accession | YP_003104690 |
|---|
| Protein GI | 256381030 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCGGCG TGGGCACACC GGATTGGGAG AGCAGCAAGG TTCCCCCGCT GCTGCGGGTG
AGCGCGGCGC TGAGCTGGCG GTTCGTCGCC GTCGTCGGCG CGCTGTACAT CGTGTCGCAG
GCCGTGGGCT ACATGGCGTC GGTGATGATC CCGGTGGGGA TCGCGCTGCT GCTGGCCGCG
CTGCTGTCCC CCGCGGTGAC GCAGCTGACC AGGGTGGGCG TGCCGCGCGG CCTGGCCACC
GGGTTCGTGC TGGTCGGCGG GCTCGCGGTG GTCGGCGGGG TGCTCACGTT CGTGATCACC
GAGTTCTCCA ACGGCCTCCC CGAGCTGCAG AACCAGGTCA CCGCGTCGCT GAGCACGATC
CGGGACTGGC TCAAGGACGG GCCGCTGCAC CTGAGCGAGC TCCAGCTCCA GCAGTACGTC
GACCAGCTGC TGGAGACGGT CAAGGCCAAC CAGGGCGAGA TCACCTCGGG CGCGCTGACC
ACGGCGGCGA CCGTGGGCGA GCTGCTGACC GGGCTCGTGC TGGCCCTGTT CACCCTCATC
TTCTTCCTGC ACGACGGCGA CGGGATCTGG CGGTTCATCA CCCGGATCGT GCCGCGCGAC
GTGCGCGCCA GGGCCGACCT GGCCGGGCGG CGCGGGTTCG CCTCGCTGGT CAGCTACGTG
CGGGCCACCG CGGTGGTCGC GGTGGTGGAC GCGGTCGGCG TCGGCATCGG GCTGTGGATC
GTCGGGGTGC CGCTGGTGGT GCCGCTGGCG GCGCTGGTGT TCCTCGGCGC GTTCATCCCG
ATCGTCGGCG CGGTGATCAC CGGCGTGGTG GCGGTGCTGA TCGCGCTGGT CGCGAACGGC
CCGGTGGCGG CGGCGGTGGT GCTGGCGATC CTGATCGGCG TGATGCAGCT GGAGAGCCAC
GTGCTGCAGC CGCTGCTGCT GGGGCGCGCG GTGAAGCTGC ACCCGCTGGC GGTGGTGCTG
GCGATCTCGA CGGGCCTGGT GGTGGCCGGG ATCGCGGGCG CGCTGCTGTC CGTGCCGCTG
CTGGCGGTGC TGAACTCGGG GATCAGGTCG CTGCTCTCGG ACGCGGACAA GCACGTGGAC
CCGCGGCGGG TGGACGTGGA CGAGCCGCAG GCGTCCGCGC CGAAGGACTT GGGGGACGAG
CACCGGGTGG ACGAGCTCGG TTCGGACGAC GACGACAAGA AGAAGGAGAG CGGTCGAGGG
CGCCGCTGA
|
|---|
| Protein sequence | MIGVGTPDWE SSKVPPLLRV SAALSWRFVA VVGALYIVSQ AVGYMASVMI PVGIALLLAA
LLSPAVTQLT RVGVPRGLAT GFVLVGGLAV VGGVLTFVIT EFSNGLPELQ NQVTASLSTI
RDWLKDGPLH LSELQLQQYV DQLLETVKAN QGEITSGALT TAATVGELLT GLVLALFTLI
FFLHDGDGIW RFITRIVPRD VRARADLAGR RGFASLVSYV RATAVVAVVD AVGVGIGLWI
VGVPLVVPLA ALVFLGAFIP IVGAVITGVV AVLIALVANG PVAAAVVLAI LIGVMQLESH
VLQPLLLGRA VKLHPLAVVL AISTGLVVAG IAGALLSVPL LAVLNSGIRS LLSDADKHVD
PRRVDVDEPQ ASAPKDLGDE HRVDELGSDD DDKKKESGRG RR
|
|---|
| |