| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_7004 |
|---|
| Symbol | |
|---|
| ID | 8331225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 8143229 |
|---|
| End bp | 8145061 |
|---|
| Gene Length | 1833 bp |
|---|
| Protein Length | 610 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644947433 |
|---|
| Product | GTP-binding protein HSR1-related |
|---|
| Protein accession | YP_003104642 |
|---|
| Protein GI | 256380982 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1159] GTPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.793634 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCC CGCAGCCGCT GCCGCTGCCG CAGCTCGTCC GCCGGACGCG GGAGAAGCTG
ACCGAGCTGG TGCGCTCGGT CGACCCGGCC GCCGCCGCGT TCGTGGACAC CCGGCGCGGC
GGGAAGGCGT CGGTCGTCGT GGTCGGCGAG ACCAACCGGG GCAAGAGCTC CCTGGTCAAC
GCCCTGCTCG CGACGCCCGG CCTGTCCCCG GTGGACGCCG AGGTCGCCAC CGCCGCGTAC
CTGGTGCTCG GCCACGGCGA GCGGTGGGCG TGCCGCGCGC GCTACGCGGG CGGCGCCCCG
CCGGTCGAGT TCGACCGCTC CCAGCTCATC GCCTGGGTGT CCGCCGCGCA CGAGCTGCCC
GAGGGCGCGC TGCCGCCGAG GTCGGTGGAG GTGGACGCCC CGATCCCGCT GCTGGAGCGG
CTCACGATCG TGGACACCCC CGGTGTCGGC GGGCTGGACA CCGCGCACGG CGAGCTGGCG
GCCGAGGCGG CGGCGGACGC GACGGCGCTG CTGTTCGTCG TGGACGCCTC CGCGCCGTTC
ACCAGGGGCG AGCTGGAGTT CCTGCGCTCG GTCGGCGAGC GGGTCGAGAC GGTCGTGTTC
GCGCTGACCA AGGTCGACCA GTTCCGGGGG TGGCGCGAGG TGGTCGAGGC GGACCGGGCG
CTGCTGGCGC AGCACGCGCC GAGGTTCGCC GGGGCGGTGT TCCACCCGGT GTCGGCGCGG
ATGTTCGAGA TGGCCGCGAA GGCCCCGAAC CCGGACGCGG CGGCCATGCT GCGCGAGCGC
TCCGGCGTCG CGGAGCTCCA GGCGGCGCTG CAGGAGCTGG TGGTCGGCCG GGCCGCGATG
CTCGGCGAGG CGAACGGGCT GCGCGCGCTC GCCACCGTGC TGGACGAGCT GGTGGCCGTG
GCCGAGGCGG ACCTGCGGGC GCTGTCGGCG GGCGAGGAGC AGGCCGAGGT GCTGCGGGGG
CGGCGCGACG AGCTGAACTC GCAGCGCAGG TCGTCCACGC GGAGCTGGCA GGTCAAGCTG
CGCGGCGAGG TGCAGCGGGC GCGCGTGGAG GGCAACCACG AGGTGGCCAG GCAGGTGCGG
GACCTCCAGA CGTGGTTCCG CACCGCGATC GACGCCGCCG ACCGGGACCA GCTGGTGGCG
CTGCCGGGTC AGGTGGACGC GGCGCTGCAG GTCGTGTCGT CCCGGATCAG CGCGGGGCTG
GGGCACCGGT TGGGCAAGGT CGCGGACCTG GCGCTGGCGG ACCTGTTCAC GCCGGACGAG
ATGGCGGTGA TCCGGGGCCA GTTCGCGCGG GGCGTCACCC CGCCGATCGT GCTGCGCCCG
CCGGAGAAGC GCACGCCCAC CGCCGAGGAC AAGCTGCTGG TGTTCATGGG CATCTCGGGC
GGGCTGGGCG CGGGCAGGCT GGCCGCGCTG CCGCTGGCGG GCCTGGGCAT CGGCGCGCTG
AACCCGGTCG TGCTGCCCGC GACGCTGGTG ATCGGGCTGG GCGCGGGGTG GTGGATGGCG
CGCACGCGCA AGCACTCGGC GGACAAGCAG CACATCAAGC AGTGGCTGTC GGACTCGATC
GCCGACGCGC GGTCCACCCT GGACCAGCTG GTGGCCGAGC AGCTGATCGA GGTCGAGCAG
CAGCTGTCGC TGGCGCTGGA CGACGCGCTC GCCAAGCGGG TCGAGGCGAT CGAGGCGGAG
CTGCGCGAGG TGGACCGCGC GCTGCGCATG GAGGCGGGCG AGCGCACCCG CGCGGTCCAG
GCGGCGACGA GGCAGGCGGC GGAGCTGCGC GCGGGGCGCG TGAAGGTGGA CGAGCTGCTG
GCCCGGATCA GGGCCGTGCG AGACCGCGCG TGA
|
|---|
| Protein sequence | MTAPQPLPLP QLVRRTREKL TELVRSVDPA AAAFVDTRRG GKASVVVVGE TNRGKSSLVN
ALLATPGLSP VDAEVATAAY LVLGHGERWA CRARYAGGAP PVEFDRSQLI AWVSAAHELP
EGALPPRSVE VDAPIPLLER LTIVDTPGVG GLDTAHGELA AEAAADATAL LFVVDASAPF
TRGELEFLRS VGERVETVVF ALTKVDQFRG WREVVEADRA LLAQHAPRFA GAVFHPVSAR
MFEMAAKAPN PDAAAMLRER SGVAELQAAL QELVVGRAAM LGEANGLRAL ATVLDELVAV
AEADLRALSA GEEQAEVLRG RRDELNSQRR SSTRSWQVKL RGEVQRARVE GNHEVARQVR
DLQTWFRTAI DAADRDQLVA LPGQVDAALQ VVSSRISAGL GHRLGKVADL ALADLFTPDE
MAVIRGQFAR GVTPPIVLRP PEKRTPTAED KLLVFMGISG GLGAGRLAAL PLAGLGIGAL
NPVVLPATLV IGLGAGWWMA RTRKHSADKQ HIKQWLSDSI ADARSTLDQL VAEQLIEVEQ
QLSLALDDAL AKRVEAIEAE LREVDRALRM EAGERTRAVQ AATRQAAELR AGRVKVDELL
ARIRAVRDRA
|
|---|
| |