Gene Amir_6932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6932 
Symbol 
ID8331152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp8062919 
End bp8064034 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content78% 
IMG OID644947363 
Productglycoside hydrolase family 76 
Protein accessionYP_003104573 
Protein GI256380913 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4833] Predicted glycosyl hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGACGC CGAAGCTGCA CGCCGCCCGC GCCGGGGTGG CCGAGCGCGC CATCCGGTCA 
CGGCACCTGC GCAGTGTCTG GGGGCTGCCC GGCACCGCGC TCGGGCTGAA CGCCTGGCCG
CCGGACCTGG GGGTCCGCGC GCACCGGAGC TTCGGCTACT GGTGGCAGGC GCACCTGGTC
GACTGCGTCG TCGACGCCCA GCTCCGCGCC CCGCGCCTGT CCAGGGCCAC CCTCGTCGAG
CAGCTGGTGC GCGGCCTGCG GGTGCGCAAC CTGACCGGCT GGACCAACGA CTACTACGAC
GACGTCGCCT GGCTCGGGCT CGCCCTGCAG CGCGCGGCGG GCGTCGGCGT CCCCCGGCCG
CGCGCCGTCG AGGCCGTCGC CACCCGGCTG CGCGAGGGCC TGACCGACCA CGGTGGCGGC
GGGCTGTGGT GGCGCAGGGG TGACGACTTC AAGAACGTGC CCGCCAACGG TCCCGCCGCG
ATCTTCTTCG CCCGCCGGGC CCGCGCGAGC GGCGACCGCG CCGACCTCGG CCGCGCCCGC
TCGATCGTGG ACTGGGTGGA GGACAACCTC GCCGACCCCG AGACCGGGCT GGTCTGGGAC
GGGCTGCACC TGCGCCCGGA CGGCTCCGTC CGCGAGGTCG AGCGCGTGCT CTACACCTAC
TGCCAGGGCG TGCACCTGGG CGCCTGCCTG GAGATCGCGC GCTCCGGCGG CGGACCGCGC
TGGGCGGACC GGGCGGCGCG GGTGATCGCG GGCGTTGACC GGGAGCTGGC GGCGGACCGG
GTGCTGCGCG GGCACGGCGG TGGCGACGGC GGGCTGTTCA GCGGCATCCT CGCCCGCTAC
CTCGCGCAGG CCGCGCTGCA CCTGGACCGG CCGGAGGCGG TGCTCGCGGC GGAGCTGGTG
GTGGCCTCGG CGGAGGCGGC GTGGGCCAAC CGGTCCGCCG CGGTGTCCGG GCCGCTGTTC
GGGCCCGACT GGGCGCGGCC CACCGGCGCG CCCGAGGCCG GTGCGGCGGA GCGGGACCTG
TCGGTGCAGC TCGGCGGCTG GATGGTGCTG GAGGCGGCGG CGCTGCTGGA GGAGCGCGGC
AGGGTGCCGC GGCGGCGGCT CACGGCGCGG GGGTGA
 
Protein sequence
MTTPKLHAAR AGVAERAIRS RHLRSVWGLP GTALGLNAWP PDLGVRAHRS FGYWWQAHLV 
DCVVDAQLRA PRLSRATLVE QLVRGLRVRN LTGWTNDYYD DVAWLGLALQ RAAGVGVPRP
RAVEAVATRL REGLTDHGGG GLWWRRGDDF KNVPANGPAA IFFARRARAS GDRADLGRAR
SIVDWVEDNL ADPETGLVWD GLHLRPDGSV REVERVLYTY CQGVHLGACL EIARSGGGPR
WADRAARVIA GVDRELAADR VLRGHGGGDG GLFSGILARY LAQAALHLDR PEAVLAAELV
VASAEAAWAN RSAAVSGPLF GPDWARPTGA PEAGAAERDL SVQLGGWMVL EAAALLEERG
RVPRRRLTAR G